Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) from Sphingobium sp. HT1-2

 Score = 65.1 bits (157), Expect = 5e-15
 Identities = 69/227 (30%), Positives = 99/227 (43%), Gaps = 26/227 (11%)

Query: 102 TVAITGSCGKTTVKEMVASILSQKG-QVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELG 160
           TVAI G+ GKTT   MVA++L   G       G   N  G    L  S    D+ V+E  
Sbjct: 110 TVAIAGTHGKTTTTSMVAALLDAGGVDPTVINGGIINSYGSNARLGNS----DWMVVE-- 163

Query: 161 ANHVGEIAYTTALVKPDVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLD 220
                E   +   +   +A+V N+   HL+ +GS D VK A  E  + +     A++ LD
Sbjct: 164 ---ADESDGSFLRLDGTIAVVTNIDPEHLDHYGSFDAVKDAFVEFVENVPFYGAAMLCLD 220

Query: 221 SNGGDYWKAVLADKTVKT--FSA----TDHNADFYPR----DVRLNALGIASFTLVTPVG 270
                     + D+ + T  FSA       N    P     DV++     A+  +     
Sbjct: 221 HPEVQAILPRVQDRRIVTYGFSAQADIRGENVQPVPGGNRFDVQIRERDGATRRI----- 275

Query: 271 EVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKGR 317
             G+EL + G+HNV NA+AA  ++L+MG   A I  G A    VK R
Sbjct: 276 -EGIELPMPGRHNVLNAMAAIGVALQMGIDDATIQTGFAKFGGVKRR 321