Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Pseudomonas putida KT2440

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 88/354 (24%), Positives = 145/354 (40%), Gaps = 39/354 (11%)

Query: 99  QTPTVAITGSCGKTTVKEMVASILSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIE 158
           + P VAI+GS  K+TV  +V  + ++ G+ +   GN    +G P   L +   + Y V+E
Sbjct: 110 KAPIVAISGSNAKSTVTTLVGEMAAKAGKRVAVGGN----LGTPALDLLADDIELY-VLE 164

Query: 159 LGANHVGEIAYTTALVKPDVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVN 218
           L +  +     TT  +  +VA V N++  H++ +  +     AK  I++G +     +VN
Sbjct: 165 LSSFQLE----TTDQLNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQ---VVVN 217

Query: 219 --------LDSNGGDYWKAVLADKTVKTFSATDHNADFYPRDVRLNALGIASFTLVTPVG 270
                   L   G   W   L     K F   + + + Y        L     TL+    
Sbjct: 218 RQDALSRPLPVEGRPCWTFGLNPPDFKAFGLREVDGEKY--------LAFEFQTLMP--- 266

Query: 271 EVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLI 330
               EL + G HN +NALAA AL    G     + + L     +  R    + R+ +   
Sbjct: 267 --ARELKVRGAHNQSNALAALALGHAAGLPFEPMLEALREFGGLAHRCQWVRERNGVNWY 324

Query: 331 DDSYNASVPAMKAAVELLGSFSAVRWLILGNMAELGDESLALHQQVGEHAAPFGFEFVLT 390
           DDS   +V A  AA+E LG+    + +++      G E  AL + V           V+ 
Sbjct: 325 DDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAEFTALREPVKRFC-----RAVVL 379

Query: 391 YGKDAKVISD-LCQGHHFATHQDMMTFIEQHIEQQQGRTQVLLVKGANSAGMSK 443
            G+DA+ +++ L         + +   ++Q  E  Q    VLL     S  M K
Sbjct: 380 LGRDAERLAEALGDAVPLVRVKTLDDAVQQCAELAQAGDAVLLSPACASLDMFK 433