Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., D-alanyl-D-alanine-adding enzyme from Pseudomonas putida KT2440

 Score =  337 bits (863), Expect = 6e-97
 Identities = 196/445 (44%), Positives = 265/445 (59%), Gaps = 6/445 (1%)

Query: 6   LSQLSSVLNARLIGEDRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVAL 65
           LSQL++ L  + IG D   + VS DSR++ A  LFVAL G RFD HD+ +     GAVA 
Sbjct: 7   LSQLTTALKGQHIGGDATFTGVSIDSRSVSAGQLFVALAGPRFDGHDYLADVKAKGAVAA 66

Query: 66  LVEREL-DAECSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVASILSQ 124
           LVERE+ D +  QL VAD + ALGQLG+   A    P VAITGS GKTTVKEM+ASIL  
Sbjct: 67  LVEREVADVDLPQLQVADCRLALGQLGALNRAAFDKPVVAITGSSGKTTVKEMLASILRT 126

Query: 125 KGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVALVNNV 184
           +G V  T+GN NND+G PLTLL    E   AVIELGA+ +GEI YT  L +P V ++NN 
Sbjct: 127 RGLVHATRGNLNNDLGAPLTLLEIAPEHSAAVIELGASRIGEIRYTVGLTQPQVVIINNA 186

Query: 185 AAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFSATDH 244
             AH+  FG  D +  AKGEI +GL  G +AI+NLD    D WKA      V +F+ ++ 
Sbjct: 187 GTAHVGEFGGPDKIVEAKGEILEGLGQGGIAILNLDDKAFDIWKARAGAHKVVSFARSNP 246

Query: 245 NADFYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGASLAEI 304
            ADF+  D+  +A G  SFTL      V V+L ++G+HNV+NALAAAA +  +G SL+ I
Sbjct: 247 KADFHASDIGRDARGCPSFTLHGAGETVAVQLNVLGEHNVSNALAAAAAAHAVGLSLSGI 306

Query: 305 GQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAVRWLILGNMAE 364
             GLA +  VKGR       + + +IDDSYNA+  +M AA+++L  FS    L+LG++ E
Sbjct: 307 AAGLAAVQPVKGRTVAQIAPNGVRVIDDSYNANPTSMCAAIDILAGFSGRTVLVLGDIGE 366

Query: 365 LGDESLALHQQVGEHA-APFGFEFVLTYGKDAKVISDLCQGHHFATHQDMMTFIEQHIEQ 423
           LG  +   H+QVG++A       + +       V +    G HFAT  +++      +  
Sbjct: 367 LGQWAEEGHRQVGDYARGKVDALYAVGSNMTHAVKAFGANGRHFATQAELI----DAVSA 422

Query: 424 QQGRTQVLLVKGANSAGMSKIAAAL 448
           +      +L+KG+ SA M  + AAL
Sbjct: 423 ENASDTTILIKGSRSAAMENVVAAL 447