Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas lactucae CFBP13502

 Score = 91.7 bits (226), Expect = 5e-23
 Identities = 89/322 (27%), Positives = 143/322 (44%), Gaps = 25/322 (7%)

Query: 19  GEDRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVERE--LDAECS 76
           G D  +  ++ DSR + A  LF+A+ G +FD     + A+  GA A+  E +       +
Sbjct: 13  GRDLLIRELTLDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVAYEVDGATVLPIT 72

Query: 77  QLVVADTKQALGQLGSWVHAQCQTPT-----VAITGSCGKTTVKEMVASILSQKGQVLYT 131
            + +   K    QL          P+     V +TG+ GKT+V ++VA  L   GQ    
Sbjct: 73  DVPLIPVKGLAKQLSDIAGRFYGEPSRHLNLVGVTGTNGKTSVTQLVAQALDLLGQHCGI 132

Query: 132 QGNFN---------------NDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKP 176
            G                  N I V  TL         AV    ++H  +    TAL   
Sbjct: 133 VGTLGSGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHGLDQGRVTALAF- 191

Query: 177 DVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTV 236
           DVA++ N++  HL+  G+M+    AK +++         +VNLD   G +  A  ++  +
Sbjct: 192 DVAVMTNLSRDHLDYHGTMEAYAAAKAKLFAWNDLKC-RVVNLDDEFGRHLAAQDSESRL 250

Query: 237 KTFSATDHNADFYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLE 296
            ++S  D +A  Y R+ + N  G+ + TLVTP GE  +   ++G+ N++N LAA    L 
Sbjct: 251 ISYSLQDSSAYLYCREAQFNDEGVRA-TLVTPQGEHHLRSTLLGRFNLSNVLAAIGALLG 309

Query: 297 MGASLAEIGQGLAHLSKVKGRV 318
           +  +L EI   L  L    GR+
Sbjct: 310 LDYALDEILNVLPKLEGPAGRM 331