Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 88/331 (26%), Positives = 136/331 (41%), Gaps = 26/331 (7%)

Query: 21  DRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVE---RELDAECSQ 77
           D  V +++ DSR +    LFVA+ G + D H F  +AV   AVA++ E   +EL    + 
Sbjct: 21  DVQVQSIAFDSRQVQEGVLFVAVRGVQADGHAFIQKAVEANAVAVVCEELPKELQPGITF 80

Query: 78  LVVADTKQALGQLGS--WVHAQCQTPTVAITGSCGKTTVKEMVASILSQKGQVLYTQGNF 135
           + V D+ +ALG++ S  + H   +   V +TG+ GKTT   ++  +  + G  +      
Sbjct: 81  VQVRDSGEALGRMASAFYGHPSTKLQLVGVTGTNGKTTSVTLLHKLFRELGYHVGLISTV 140

Query: 136 NNDIGVPLTLLRSTTEDDYAVIEL-------GANHVGEIAYTTALVKPDVA-------LV 181
            N I   +     TT D   + EL       G  H      + A+V+  VA       + 
Sbjct: 141 QNQIDEEIIPATHTTPDAVKLNELLAQMVKAGCTHCFMEVSSHAMVQQRVAGITFAGGVF 200

Query: 182 NNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFSA 241
            N+   HL+  GS +   +AK   +  L   A A+VN D   G     V   K    F A
Sbjct: 201 TNITHDHLDYHGSFEDYIKAKKSFFDMLPKTAFALVNADDKRGPV--MVQNTKASAHFYA 258

Query: 242 TDHNADFYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGASL 301
                +F  R +     G     L   V    +   ++G  N  N L A  +++ +G   
Sbjct: 259 LRKAEEFKARIIDNTIQG-----LHLEVDGQEIWCKLIGAFNAYNLLGAYGVAVLLGEDP 313

Query: 302 AEIGQGLAHLSKVKGRVDMAQLRDDITLIDD 332
            E    L+ L+   GR D       IT I D
Sbjct: 314 MEALTVLSSLNSAAGRFDYIVSESQITGIVD 344