Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase from Magnetospirillum magneticum AMB-1

 Score =  198 bits (504), Expect = 3e-55
 Identities = 145/440 (32%), Positives = 212/440 (48%), Gaps = 21/440 (4%)

Query: 27  VSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVER--ELDAECSQLV-VADT 83
           VS DSR+I    LF+AL G   D HD  + A+  GA A LV +     AE + LV V DT
Sbjct: 29  VSIDSRSIEPGDLFIALEGPNHDGHDHVASALANGAAAALVHKLPRGTAEDAPLVLVKDT 88

Query: 84  KQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVASILSQKGQVLYTQGNFNNDIGVPL 143
             AL  LG    A+     VA+TGS GKT  KEM+A  LS +G   Y+ G+FNN  GVPL
Sbjct: 89  MTALQDLGIASRARSTARIVAVTGSVGKTGTKEMLALALSDQGATHYSVGSFNNHWGVPL 148

Query: 144 TLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVALVNNVAAAHLEGFGSMDGVKRAKG 203
           +L R  T   YA+ E+G NH GEI     +V+P VA++  V   H+E F S   +  AK 
Sbjct: 149 SLARMPTAVQYAIFEIGMNHPGEITPLVRMVRPHVAVITTVEMVHMEFFASTAEIAAAKA 208

Query: 204 EIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFSATDHNADFYPR--DVRLNALGIA 261
           EI+ G++ G  A++  D+    Y         +K   +  ++ +   R  D  ++    A
Sbjct: 209 EIFDGVETGGTAVLPRDNAHFAYLNDAARTAGLKDIRSFGNHIEATARLLDCAVDPQSTA 268

Query: 262 SFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKGRVDMA 321
            F LV     +   +G+ G+    N+LA       +GA +      LA ++  KGR    
Sbjct: 269 VFALVAD-QPLSYRVGVAGRQWAMNSLAVLLAVEALGADVNLAAMALAAMAAPKGRGQRR 327

Query: 322 QLR---DDITLIDDSYNASVPAMKAAVELLGSFSAV----RWLILGNMAELGDESLALHQ 374
           ++        LID+SYNAS  +MKAA+ +L S        R  +LG+M ELG +  +LH 
Sbjct: 328 RIEIEGGSFELIDESYNASPVSMKAAIAMLASVRPAKGGRRIAVLGDMLELGPQGPSLHA 387

Query: 375 QVGEHAAPFGFEFVLTYGKDAKVISDLC----QGHHFATHQDMMTFIEQHIEQQQGRTQV 430
            V E    +  + V T G     + D      +G H A    +   ++  +        V
Sbjct: 388 SVAETVESWNIDLVFTAGTLTAHLHDALAAPRRGGHAADSDAVAALVKAGVRP----GDV 443

Query: 431 LLVKGANSAGMSKIAAALKE 450
           ++VKG+  + M ++  AL E
Sbjct: 444 VMVKGSAGSRMGRVVNALAE 463