Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., UDP-N-acetylmuramate--alanine ligase from Magnetospirillum magneticum AMB-1

 Score = 79.0 bits (193), Expect = 3e-19
 Identities = 73/235 (31%), Positives = 112/235 (47%), Gaps = 19/235 (8%)

Query: 103 VAITGSCGKTTVKEMVASILSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGAN 162
           + I G+ GK+T   M+  IL + G+             V    +R  +    A++  G  
Sbjct: 113 IGIAGTSGKSTTTGMLGWILERCGRRPTVMNG-----AVMKNFVRPDSPFSSALVGDGPA 167

Query: 163 HVGEIAYTTALVK---PDVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGA-VAIVN 218
            V E+  +   +    P +ALVNN+A  H     SMD ++R    ++    A A VA++N
Sbjct: 168 FVAEVDESDGSIANYAPRIALVNNIALDHK----SMDELRR----LFADFTAKARVAVLN 219

Query: 219 LDSNGGDYWKAVLADKTVKTFSATDHNADFYPRDVRLNALGIASFTLVTPVGE-VGVELG 277
           LD+       A L    V T+S  D  AD +  +V     GIA FT  T  G+ + V+L 
Sbjct: 220 LDNGETAALAATLPADRVVTYSLEDPGADLWAENVSPAPDGIA-FTARTRDGKTMPVKLL 278

Query: 278 IMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLIDD 332
           + G+HNV+NALAA A +L  G  L +    L   S V+ R++    +  +T+IDD
Sbjct: 279 VPGRHNVSNALAALAGALAAGLGLEDAATALGEFSGVRRRLETVGTKGGVTVIDD 333