Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  411 bits (1056), Expect = e-119
 Identities = 229/452 (50%), Positives = 301/452 (66%), Gaps = 4/452 (0%)

Query: 1   MIRVMLSQLSSVLNARLIGEDRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTG 60
           MI V LS+++ VL A   G D  +  V TD+R +    LFVAL GERFDAHDFA +A   
Sbjct: 1   MISVTLSKIADVLGAEHRGADLTLDTVITDTRKVTPGCLFVALKGERFDAHDFADKAKAN 60

Query: 61  GAVALLVERELDAECSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVAS 120
           GA ALLV R LD +  Q++V DT+QA GQL +WV  Q     VA+TGS GKT+VKEM A+
Sbjct: 61  GAGALLVSRPLDIDLPQVIVKDTRQAFGQLAAWVRMQVPARVVALTGSSGKTSVKEMTAA 120

Query: 121 ILSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVAL 180
           ILSQ G  LYT GNFNNDIGVP+TLLR   + DYAVIELGANH GEIA+T +L +P+ AL
Sbjct: 121 ILSQCGNTLYTAGNFNNDIGVPITLLRLNHDYDYAVIELGANHQGEIAWTVSLTRPEAAL 180

Query: 181 VNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFS 240
           VNN+AAAHLEGFGS+ GV +AKGEIY GL    +AI+N D+N    W++++ D+ V  FS
Sbjct: 181 VNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGIAIMNADNNDWLNWQSIIGDRLVWRFS 240

Query: 241 ATDHNADFYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGAS 300
               N+DF   ++ + + G   FTL TP+G + V L + G+HN+ANALAAAALS+ +GA+
Sbjct: 241 PNAANSDFTAANIHVTSHG-TEFTLQTPMGSIDVLLPLPGRHNIANALAAAALSMAVGAT 299

Query: 301 LAEIGQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAVRWLILG 360
           L  I  GLA L  V GR+   QL ++  ++DD+YNA+V +M AAV++L      R L++G
Sbjct: 300 LTAIKAGLAALKAVPGRLFPIQLSENQLVLDDAYNANVGSMTAAVQVLSEMPGYRVLVVG 359

Query: 361 NMAELGDESLALHQQVGEHAAPFGFEFVLTYGKDAKVISDLC-QGHHFATHQDMMTFIEQ 419
           +MAELG ES A H QVGE A   G + VL+ GK ++ IS     G HFA    ++  +  
Sbjct: 360 DMAELGAESEACHLQVGEAAKAAGIDRVLSTGKLSQAISHASGVGEHFADKAALIARLHA 419

Query: 420 HIEQQQGRTQVLLVKGANSAGMSKIAAALKEK 451
            +++Q   T  +LVKG+ SA M  +  AL+EK
Sbjct: 420 LLQEQPMMT--ILVKGSRSAAMEDVVHALQEK 449