Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) from Enterobacter asburiae PDN3

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 95/359 (26%), Positives = 162/359 (45%), Gaps = 40/359 (11%)

Query: 21  DRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVERELDAECSQL-- 78
           +RA+  +  DSR   +  LFVA+VG + D   +  QA+  G  A++ E + +A   ++  
Sbjct: 19  ERALREMVLDSRVAASGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKDEATDGEIRE 78

Query: 79  -------VVADTKQALGQL-GSWVHAQC-QTPTVAITGSCGKTTVKEMVAS---ILSQKG 126
                   ++   + L  L G + H    Q   V +TG+ GKTT  +++A    +L + G
Sbjct: 79  MHGVPVIYLSQLNERLSALAGRFYHEPSDQLRLVGVTGTNGKTTTTQLLAQWAQLLGETG 138

Query: 127 QVLYTQGNFNNDIGVPLTLLRSTTED-------------DYAVIELGANHVGEIAYTTAL 173
            V+ T GN       P      +  D              +A +E+ ++  G + +  A 
Sbjct: 139 AVMGTVGNGLLGKVSPTENTTGSAVDVQHVLAGLAGQGATFAAMEVSSH--GLVQHRVAA 196

Query: 174 VKPDVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLAD 233
           +K   ++  N++  HL+  G M+  + AK  ++     G  AI+N D   G  W A L D
Sbjct: 197 LKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLFSTHHYGQ-AIINADDEVGRRWLAKLPD 255

Query: 234 KTVKTFSATDH-NADFYPR-----DVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANA 287
                 S  DH N + + R     +V  +  G A+    +  GE  +E  +MG  NV+N 
Sbjct: 256 AVA--VSMEDHINPNCHGRWLKAVEVNYHDSG-ATIRFASSWGEGEIESRLMGAFNVSNL 312

Query: 288 LAAAALSLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVE 346
           L A A  L +G  +AE+ +  A L  V GR+++       T++ D Y  +  A++ A+E
Sbjct: 313 LLALATLLALGYPMAELLKTSARLQPVCGRMEVFSAPGKPTVVVD-YAHTPDALEKALE 370