Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase from Escherichia coli ECRC62

 Score =  425 bits (1092), Expect = e-123
 Identities = 238/451 (52%), Positives = 304/451 (67%), Gaps = 4/451 (0%)

Query: 1   MIRVMLSQLSSVLNARLIGEDRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTG 60
           MI V LSQL+ +LN  L G D  + AV+TD+R +    LFVAL GERFDAHDFA QA  G
Sbjct: 1   MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAG 60

Query: 61  GAVALLVERELDAECSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVAS 120
           GA ALLV R LD +  QL+V DT+ A G+L +WV  Q     VA+TGS GKT+VKEM A+
Sbjct: 61  GAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAA 120

Query: 121 ILSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVAL 180
           ILSQ G  LYT GN NNDIGVP+TLLR T E DYAVIELGANH GEIA+T +L +P+ AL
Sbjct: 121 ILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAAL 180

Query: 181 VNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFS 240
           VNN+AAAHLEGFGS+ GV +AKGEI+ GL    +AI+N D+N    W++V+  + V  FS
Sbjct: 181 VNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQSVIGSRKVWRFS 240

Query: 241 ATDHNADFYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGAS 300
               N+DF   ++ + + G   FTL TP G V V L + G+HN+ANALAAAALS+ +GA+
Sbjct: 241 PNAANSDFTATNIHVTSHG-TEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSVGAT 299

Query: 301 LAEIGQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAVRWLILG 360
           L  I  GLA+L  V GR+   QL ++  L+DDSYNA+V +M AAV++L      R L++G
Sbjct: 300 LDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVG 359

Query: 361 NMAELGDESLALHQQVGEHAAPFGFEFVLTYGKDAKVISDLC-QGHHFATHQDMMTFIEQ 419
           +MAELG ES A H QVGE A   G + VL+ GK +  IS     G HFA    ++T ++ 
Sbjct: 360 DMAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSHAISTASGVGEHFADKTALITRLKS 419

Query: 420 HIEQQQGRTQVLLVKGANSAGMSKIAAALKE 450
            I +QQ  T  +LVKG+ SA M ++  AL+E
Sbjct: 420 LIAEQQVIT--ILVKGSRSAAMEEVVRALQE 448