Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase from Escherichia coli ECRC101

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 107/429 (24%), Positives = 183/429 (42%), Gaps = 43/429 (10%)

Query: 22  RAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVERELDAECSQ---- 77
           RA+  ++ DSR   A  LFVA+VG + D   +  QA+  G  A++ E + +A   +    
Sbjct: 20  RALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKGEATDGEIREM 79

Query: 78  -----LVVADTKQALGQL-GSWVHAQCQT-PTVAITGSCGKTTVKEMVA---SILSQKGQ 127
                + ++   + L  L G + H        V +TG+ GKTT  +++A    +L +   
Sbjct: 80  HGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSA 139

Query: 128 VLYTQGN--------FNNDIGVPLTL---LRSTTEDDYAVIELGANHVGEIAYTTALVKP 176
           V+ T GN          N  G  + +   L    + D     +  +  G + +  A +K 
Sbjct: 140 VMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQDATFCAMEVSSHGLVQHRVAALKF 199

Query: 177 DVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTV 236
             ++  N++  HL+  G M+  + AK  +Y     G  AI+N D   G  W A L D   
Sbjct: 200 AASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQ-AIINADDEVGRRWLAKLPDAV- 257

Query: 237 KTFSATDH-NADFYPRDVRLNALGI----ASFTLVTPVGEVGVELGIMGQHNVANALAAA 291
              S  DH N + + R ++   +      A+    +  G+  +E  +MG  NV+N L A 
Sbjct: 258 -AVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLAL 316

Query: 292 ALSLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSF 351
           A  L +G  LA++ +  A L  V GR+++       T++ D Y  +  A++ A++     
Sbjct: 317 ATLLALGYPLADLLKTAARLQPVCGRMEVFTAPGKPTVVVD-YAHTPDALEKALQAARLH 375

Query: 352 SAVR-WLILGNMAELGDESLALHQQVGEHAAPFGFEFVLT-----YGKDAKVISDLCQGH 405
            A + W + G     GD        +G  A  F    V+T       +   +I+D+  G 
Sbjct: 376 CAGKLWCVFGCG---GDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGM 432

Query: 406 HFATHQDMM 414
             A H  +M
Sbjct: 433 LDAGHAKVM 441