Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dickeya dianthicola ME23

 Score =  413 bits (1061), Expect = e-120
 Identities = 239/456 (52%), Positives = 294/456 (64%), Gaps = 13/456 (2%)

Query: 1   MIRVMLSQLSSVLNARLIGEDRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTG 60
           MIRV L QL+ VL ARL+GED  +S VSTD+R +    LFVAL GE+FDAHD+A+ AV  
Sbjct: 1   MIRVSLRQLADVLGARLVGEDLTISEVSTDTRKLTTGCLFVALRGEKFDAHDYAADAVNH 60

Query: 61  GAVALLVERELDAECSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVAS 120
           GA ALLV + L  E  QLVV DT+ ALG +  WV  Q +   VA+TGS GKT+VKEM A+
Sbjct: 61  GAAALLVSKHLPIEVPQLVVDDTRLALGTMAGWVRQQSRARVVALTGSSGKTSVKEMTAA 120

Query: 121 ILSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVAL 180
           IL Q G VLYT GNFNNDIGVPLTL R   E DYAVIELGANH+GEIAYTTA+V+P+ AL
Sbjct: 121 ILRQCGNVLYTAGNFNNDIGVPLTLFRLAPEHDYAVIELGANHIGEIAYTTAMVRPEAAL 180

Query: 181 VNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFS 240
           VNN+AAAHLEGFGS+DGV +AKGEI+ GL A  VAIVN DS+    W   L  KT   FS
Sbjct: 181 VNNLAAAHLEGFGSLDGVAQAKGEIFSGLPAQGVAIVNADSHDEARWHDALTGKTRWRFS 240

Query: 241 ATDH-NADFYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGA 299
                  DFY  DV ++  G   F L TP G V V L + G+HN+ANALAAAALSL +GA
Sbjct: 241 PQARAGVDFYASDVGISERG-TDFVLHTPAGAVAVTLPLPGRHNIANALAAAALSLAVGA 299

Query: 300 SLAEIGQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAVRWLIL 359
            L  +  GLA L  V GR+    L     L+DDSYNA+V +M AA ++L      R +++
Sbjct: 300 PLDAVKTGLAQLQAVPGRLFPIALAPGKLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVV 359

Query: 360 GNMAELGDESLALHQQVGEHAAPFGFEFVLTYGKDAKVISDLC-QGHHF----ATHQDMM 414
           G+MAELG  + A H+QVGE A     + VL+ G  +  I D+   G HF    A    + 
Sbjct: 360 GDMAELGLGAQACHRQVGEAARKANIDKVLSVGTLSAFIGDVSGAGEHFDNKTALIDRLR 419

Query: 415 TFIEQHIEQQQGRTQVLLVKGANSAGMSKIAAALKE 450
           T + QH       T  +L+KG+ SA M ++  AL+E
Sbjct: 420 TLVTQH------NTITVLIKGSRSAAMEQVVHALQE 449