Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Bacteroides ovatus ATCC 8483

 Score =  213 bits (542), Expect = 1e-59
 Identities = 149/424 (35%), Positives = 228/424 (53%), Gaps = 20/424 (4%)

Query: 26  AVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGG-AVALLVERELDAECSQ--LVVAD 82
           +V+TDSR  P  +LF+AL GE F+ + FA  A+  G A A++ E E   E  +  ++V +
Sbjct: 15  SVTTDSRNCPDGSLFIALKGESFNGNAFAKLALDSGCAFAIIDEAEYAVEGDKRYILVDN 74

Query: 83  TKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVASILSQKGQVLYTQGNFNNDIGVP 142
             Q + QL ++   Q  T  + ITG+ GKTT KE+++S+L Q   VLYT GN NN IGVP
Sbjct: 75  CLQTMQQLANYHRRQLGTRVIGITGTNGKTTTKELISSVLCQAHNVLYTLGNLNNHIGVP 134

Query: 143 LTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVALVNNVAAAHLEGFGSMDGVKRAK 202
            TLLR   E D AVIE+GANH GEI +   + +PD  ++ NV  AHLEGFGS +GV + K
Sbjct: 135 TTLLRLKPEHDLAVIEMGANHPGEIKFLCEIAEPDYGIITNVGKAHLEGFGSFEGVIKTK 194

Query: 203 GEIYQGL-QAGAVAIVNLDSNGGDYWKAVLADKTVKTFSATDHNADFYPR-DVRLNALGI 260
           GE+Y  L +  A+  ++ D+    Y   +     + ++   D   D Y    +  N+  +
Sbjct: 195 GELYDFLRKKDAITFIHHDN---AYLMNIAQGLNLISYGTED---DLYVNGQITDNSPYL 248

Query: 261 ASFTLVTPVGE-VGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKGRVD 319
           A        GE   V   ++G++N  NALAA  +    G    +I + LA  +    R  
Sbjct: 249 AFEWKAGKDGERHQVRTQLIGEYNFPNALAAITIGRFFGVEAKKIDEALASYTPQNNRSQ 308

Query: 320 MAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAV-RWLILGNMAELGDESLALHQQVGE 378
           + +  D+ TLI D+YNA+  +M AA++   + +   + LILG+M ELG ES A HQ++ +
Sbjct: 309 LKKTEDN-TLIIDAYNANPTSMMAALQNFRNMTVPHKMLILGDMRELGAESPAEHQKIVD 367

Query: 379 HAAPFGFEFVLTYGKDAKVISDLCQGHHFATHQDMMTFIEQHIEQQQGRTQVLLVKGANS 438
           +    GFE V   G+           H F T+ +    I+  ++  + +   +L+KG+N 
Sbjct: 368 YIKESGFEKVWLVGE-----LFAASEHSFKTYANAQEVIKD-LQADKPKGYTILIKGSNG 421

Query: 439 AGMS 442
             +S
Sbjct: 422 IKLS 425