Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., UDP-N-acetylmuramate--L-alanine ligase from Phocaeicola dorei CL03T12C01

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 16/232 (6%)

Query: 103 VAITGSCGKTTVKEMVASILSQKGQVLYT-QGNFNNDIGVPLTLLRSTTEDDYAVIELGA 161
           + + G+ GKTT   M A +L Q         G  + + G  L L  S+   +Y VIE   
Sbjct: 115 LCVAGTHGKTTTSTMTAHLLHQSHVGCNAFLGGISKNYGTNLLLSDSS---EYMVIE--- 168

Query: 162 NHVGEIAYTTALVKPDVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDS 221
               E   +   + P ++++      HL+ +G+ +    +  +    +Q G   IV    
Sbjct: 169 --ADEFDRSFHWLSPYISVITATDPDHLDIYGTKEAYLESFRKYTSLIQPGGALIVR--- 223

Query: 222 NGGDYWKAVLADKTVKTFSATDHNADFYPRDVRLNALGIASFTLVTPVGEV-GVELGIMG 280
            G +   A+     VK ++ +    DF+  ++R+   G   F  V+P+G +  ++LG+  
Sbjct: 224 KGIELQPAL--QNGVKLYTYSKEEGDFHAENIRIGN-GEIFFDYVSPLGNIPNIQLGVPV 280

Query: 281 QHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLIDD 332
             N+ N +AA AL+   G +  EI +G+A    V  R D     D +  + D
Sbjct: 281 SINIENGVAAMALAQMSGLTDEEIKRGMASFRGVDRRFDFKIKNDKVVFLSD 332