Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Alteromonas macleodii MIT1002

 Score =  382 bits (980), Expect = e-110
 Identities = 209/454 (46%), Positives = 299/454 (65%), Gaps = 6/454 (1%)

Query: 1   MIRVMLSQLSSVLNARLI--GEDRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAV 58
           MI   LS ++  +N +L+    D  VSAVSTD+R +   A+++AL G  F+ HDF S A 
Sbjct: 1   MITTTLSWIAEKVNGKLLKGAADVEVSAVSTDTRTLEDGAVYLALKGPNFNGHDFISTAE 60

Query: 59  TGGAVALLVERELDAECSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMV 118
             GA A++   ++      ++V DTK+ALG LG+ V A     T+AITGS GKTTVKEM 
Sbjct: 61  KAGASAVIASEDVATSLPVIMVEDTKEALGLLGAAVKAYVAPKTIAITGSSGKTTVKEMC 120

Query: 119 ASILSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDV 178
           A+IL ++G VL T GNFNNDIGVPLTLLR   + +YAV+ELGANH+GEIAYTT LVKPDV
Sbjct: 121 AAILERRGNVLATNGNFNNDIGVPLTLLRLEPQHEYAVMELGANHIGEIAYTTNLVKPDV 180

Query: 179 ALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKT 238
           A + N AA+HLEGFGS+ GV RAK EI++GL +  VA+VN+DS   ++W+  L      T
Sbjct: 181 ATIVNAAASHLEGFGSLLGVARAKSEIFKGLGSDGVAVVNVDSQFAEFWQGKLKQTKTLT 240

Query: 239 FSATDHN-ADFYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEM 297
           FS    N ADF   D+ +   G A+F LV P G++ ++L I G HNV NAL AAAL+L++
Sbjct: 241 FSPQQKNDADFRAEDITIGLDGCAAFHLVCPRGDMSIQLTIPGVHNVGNALVAAALTLQV 300

Query: 298 GASLAEIGQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAVRWL 357
           GA+L  +  GL  + +V GR+++ QL + + L+DD+YNA+V ++ AA++ L SFS +R L
Sbjct: 301 GATLENVRDGLLAMKQVSGRLNVKQLTEQVRLLDDTYNANVASVNAAIDTLSSFSGIRVL 360

Query: 358 ILGNMAELGDESLALHQQVGEHAAPFGFEFVLTYGKDAKVISDLC--QGHHFATHQDMMT 415
           +LG+M ELG+++   H+QVGE+A   G  ++ T G  ++  S +    G HF+  + ++ 
Sbjct: 361 VLGDMKELGEKARFYHEQVGEYAKQKGINYLYTMGVLSQSASAVFNENGGHFSDVESLLA 420

Query: 416 FIEQHIEQQQGRTQVLLVKGANSAGMSKIAAALK 449
            +E  +  QQ R   +LVKG+ S+ M ++  A++
Sbjct: 421 AMESDLLVQQ-RDISILVKGSRSSRMERVVEAVE 453