Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Acinetobacter radioresistens SK82

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 85/348 (24%), Positives = 154/348 (44%), Gaps = 39/348 (11%)

Query: 14  NARLIGEDRAVSAVSTDSRAIPAEALFVAL--VGERFDAHDFASQAVTGGAVALLVEREL 71
           NA +   ++  S    DSR + A  +F+AL  + +      FA  A++ GA+ ++ E +L
Sbjct: 12  NANVEWANQPFSGFCLDSRKVQAGQIFIALDSLSQSDKTRIFAENALSQGALGIISESDL 71

Query: 72  DAECSQLVVADTKQALGQLGSWV--HAQCQTPT-----VAITGSCGKTTVKEMVASILSQ 124
               + +      Q    +G W   + Q   P      +A+TG+ GKTT+  ++A ++S 
Sbjct: 72  GVTTAWVC----PQVRQWMGGWQKQYLQATRPVNSARILAVTGTNGKTTISRLIAELISF 127

Query: 125 KGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIEL-------GANHVGEIAYTTALVKP- 176
           + Q     G   N I   L     TT D   +          GAN V   A +  L +  
Sbjct: 128 QKQPCAVMGTTGNGILPHLVASTHTTLDALQLQNALHDFSSQGANFVALEASSHGLEQGR 187

Query: 177 ------DVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAV 230
                 ++A+ +N++  HL+  G++     AK  +++     + A++NLD    DY   +
Sbjct: 188 LNGCEIEIAIYSNLSRDHLDYHGTLTAYADAKALLFKFATLRS-AVINLDD---DYAPVM 243

Query: 231 L-------ADKTVKTFSATDHNADFYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHN 283
           L       A   + T+S     AD+   D+  +  G A F L+ P GE  V+  ++GQ N
Sbjct: 244 LETAQANPARPKILTYSLQHPEADYRVSDIHYSLKG-AKFKLIAPTGEYVVQSPLLGQFN 302

Query: 284 VANALAAAALSLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLID 331
           + N +A+     + G  L++I   +  L    GR+ + +  + + ++D
Sbjct: 303 IENLVASLIAVEQAGFKLSDILATVPQLKGAPGRMQVIRDAERLFVVD 350