Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase from Xanthobacter sp. DMC5

 Score = 61.6 bits (148), Expect = 5e-14
 Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 40/275 (14%)

Query: 114 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVPALD------LISPD-VELYV--- 163
           + AITG+ GK++V      +    G +AA  G IG+   +      L +PD VEL+    
Sbjct: 109 IAAITGTAGKTSVAFFLRQIWERLGHRAAYLGTIGLVKPNGATYGSLTTPDPVELHATLD 168

Query: 164 -----------LELSSFQLETT--SSLKLKAAAFLNLSEDHMDRYQGMEDYRQAKLRIF- 209
                      LE SS  L+      ++L A  F NL  DH+D +  M+ Y +AKLR+F 
Sbjct: 169 ALAGEGVTHMALEASSHGLDQKRLDGVRLSAGGFTNLGRDHLDYHPTMDAYFRAKLRLFT 228

Query: 210 -----DHAETAVVNADDTQTFP--DHAAHLQVVTFGVEQAAQFSLA----QHQGREYLFA 258
                D A  AV +A    T     H   L+++  G  +A    +A       G++ +FA
Sbjct: 229 EVMPLDAAAVAVTSAPFAATALAWAHTRGLRLLPIGEGRADGIDIAAATGSPAGQKVMFA 288

Query: 259 RDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRCQVVADN- 317
              +    A + LVGR  + N L    L  + G +   A  AL    G+  R + + D+ 
Sbjct: 289 DGTS----AVVPLVGRFQLDNALLAAGLAIACGADRTEAFAALAHLKGVPGRLERIGDDP 344

Query: 318 HGIKWVNDSKATNVASTLAALSGLKIEGQLYLLVG 352
               +V+ +      +T+       I G+L ++VG
Sbjct: 345 RRPVFVDYAHKPEALATVLDTLRAAIPGRLVVVVG 379