Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Pseudomonas simiae WCS417

 Score =  322 bits (824), Expect = 2e-92
 Identities = 196/441 (44%), Positives = 256/441 (58%), Gaps = 14/441 (3%)

Query: 15  VVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSD---VALHRSGWNLEWLL 71
           +VVGLG +G+S+V +L        V   DTRE PP    L  D   V +     ++E+L 
Sbjct: 11  IVVGLGKSGMSLVRFLASRGKPFAVA--DTRENPPELVTLRRDYPHVEVRCGELDVEFLC 68

Query: 72  NADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDTPVIAITGSNGKSTVTDLSG 131
            AD +  +PG+A+ATP +Q   A G+ + GDI+LFA +   P++AI+GSN KSTVT L G
Sbjct: 69  RADELYVSPGLAIATPALQAAAARGVKLSGDIDLFARNAQAPIVAISGSNAKSTVTTLVG 128

Query: 132 VLANAAGVKAAVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKAAAFLNLSEDH 191
            +A AAG + AVGGN+G PALDL+S DVELYV+ELSSFQLETT  L  + A  LN+SEDH
Sbjct: 129 EMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTHDLGAEVATVLNVSEDH 188

Query: 192 MDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAHLQVVTFGVEQA--AQFSLAQ 249
           MDRY G+  Y  AK RIF  A+  VVN  D  + P     L   TFG+ +     F + +
Sbjct: 189 MDRYSGLPAYHLAKHRIFRGAKQVVVNRQDALSRPLMGEGLPCWTFGLGKPDFKAFGIRE 248

Query: 250 HQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTH 309
             G +YL    + +M   EL + G HN +N L  LAL  + G+ F   L AL+++ GL H
Sbjct: 249 ENGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSALRTFGGLEH 308

Query: 310 RCQVVADNHGIKWVNDSKATNVASTLAALSGL--KIEGQLYLLVGGVGKGADFTPLAPVL 367
           RCQ V D  G+ + NDSKATNV + LAA+ GL   IEG+L L+ GG GKGADF  L   +
Sbjct: 309 RCQWVRDLDGVSYYNDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGADFKDLKGPV 368

Query: 368 ATLPVQLCCFGVDGHQFM----PLHPSARFYDSMESIIRSIRPQLKSGDMVLLSPACASF 423
           A     +   G D            P  R   S++  I   +   + GD VLLSPACASF
Sbjct: 369 AEHCRAVVLMGRDSDLIAAALGDAVPQVR-ATSLDDAIAQCKALAQPGDAVLLSPACASF 427

Query: 424 DQFKNFMARGDIFAQLARQYA 444
           D FKN+  RG +FA+     A
Sbjct: 428 DMFKNYEERGQLFARAVEALA 448