Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase (EC 6.3.2.10) from Variovorax sp. SCN45

 Score = 67.8 bits (164), Expect = 7e-16
 Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 40/285 (14%)

Query: 113 PVIAITGSNGKSTVTDLSGVLANAA----GVKA-AVGGN----IGVP-ALDLISPDVELY 162
           P+IA+TGSNGK+TVT +   +  AA    G  A A  GN    IGVP  L  +    +  
Sbjct: 109 PLIAVTGSNGKTTVTQMIAAVLFAARADRGESALATAGNFNNEIGVPLTLLRLRAQHQRA 168

Query: 163 VLELS---SFQLETTSSLKLKAAAFLNLSE-DHMDRYQGMEDYRQAKLRIFDHAETAVVN 218
           VLEL      ++   +++     A +N ++ +H +    +E        +F     AV+ 
Sbjct: 169 VLELGMNHPGEIARLAAMSRPTIALVNNAQREHQEFMATVEAVAVENAAVF-----AVLP 223

Query: 219 ADDTQTFP---------DHAAHL----QVVTFGVEQAAQFSLAQHQGREYLFA---RDEA 262
            D T  FP            AH     + +TFG  Q A  SL   + ++  +A   R   
Sbjct: 224 DDGTAVFPYGDAFTSLWTDMAHAGGSRRCMTFGEHQDADISLDGAEWKQGAWAVRIRTPI 283

Query: 263 VMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRCQ----VVADNH 318
               A L + GRHNV N L   A   +AGV+  +    L ++  +  R +    V+AD  
Sbjct: 284 GSFDARLHIAGRHNVVNALAATACALAAGVSTDIIAAGLSAFEPVKGRSRASEIVLADGR 343

Query: 319 GIKWVNDSKATNVASTLAALSGL-KIEGQLYLLVGGVGKGADFTP 362
            +  V+DS   N  S +AA+  L  + G   L++G +G+  + +P
Sbjct: 344 AVTLVDDSYNANPDSVIAAIDVLAALPGPRLLVLGDMGEVGERSP 388