Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 65.5 bits (158), Expect = 4e-15
 Identities = 89/310 (28%), Positives = 125/310 (40%), Gaps = 61/310 (19%)

Query: 95  AGIPVVGDIEL-----------FAWHVDTPVIAITGSNGKSTVTDLSGVLANAAGVKAAV 143
           AG+PV+   EL           +  H    +I +TG+NGK+T+T L        G KAAV
Sbjct: 102 AGVPVIYLAELGQHLSELAGRLYGGH-HNQLIGVTGTNGKTTITQLIAQWLELLGHKAAV 160

Query: 144 GGNIGVPALDLISP---------DVELYVLELSS-----FQLETTS---------SLKLK 180
            G  G   L+ + P          ++  + +L+        LET+S          L   
Sbjct: 161 MGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFV 220

Query: 181 AAAFLNLSEDHMDRYQGMEDYRQAKLRIF-DHA-ETAVVNADDTQTFPDHAAHLQVV--- 235
           A  F NLS DH+D +  ME Y  AK  +F +HA + A++N DD       A   Q V   
Sbjct: 221 AGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIINVDD-------AVGAQWVKQL 273

Query: 236 --TFGVEQAAQFSLAQH-QGREYLFARD------EAVMACAEL--SLVGRHNVANVLTVL 284
               GV    + + AQ    RE  +A        E+     EL   L+G  N  N+L  L
Sbjct: 274 PQAIGVSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLAL 333

Query: 285 ALLDSAGVNFRLALDALKSYTGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIE 344
           A L S G      L        +  R ++       K V D   T  A    AL  L++ 
Sbjct: 334 ATLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYAHTPDALE-KALRALRVH 392

Query: 345 --GQLYLLVG 352
             GQL+ +VG
Sbjct: 393 CAGQLWAIVG 402