Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., UDP-N-acetylmuramoyl-dipeptide--2,6- diaminopimelate ligase (EC 6.3.2.13) from Sphingobium sp. HT1-2

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 39/223 (17%)

Query: 115 IAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP------ALDLISPDVELYVLELSS 168
           +A+TG+NGK++  +L+  L    G K+A  G +GV       +  L +PD+  ++  +S 
Sbjct: 104 VAVTGTNGKTSTVELARQLWRMLGHKSASIGTLGVTTSVDQVSTGLTTPDIVTFLANMSG 163

Query: 169 FQLE-----------------TTSSLKLKAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDH 211
            + E                  T  L + A AF NLS DH+D +  M+ Y  AK+R+FD 
Sbjct: 164 LKREGITHAAFEASSHGLDQYRTEGLPVAAGAFTNLSRDHLDYHGDMDSYFDAKMRLFDE 223

Query: 212 ----AETAVVNADDTQTFPDHAAH------LQVVTFGVEQAAQFSLAQH---QGREYLFA 258
                  AV+ ADD   + D A        L+V++ GV Q     LA     Q  + L  
Sbjct: 224 VVGDGGAAVIWADD--EWSDKAIQRATKRGLRVLSVGV-QGQALRLANRTPTQLGQTLEI 280

Query: 259 RDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDAL 301
             +  +    L L+G +  AN LT   L+ + G +    L+ L
Sbjct: 281 EADGKIYKVNLPLIGAYQAANALTAAGLVIATGGDTAKVLELL 323