Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) from Sphingobium sp. HT1-2

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 27/325 (8%)

Query: 11  IQHVVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVALHRSGWNLEWL 70
           I  + + G+G++G++ V +   Y     VQ  D  E    +   +  + +   G   E L
Sbjct: 11  IHFIGIGGIGMSGIAEVMHNLGYK----VQGSDVAEGYVVEGLRAKGIKV-MIGHKAENL 65

Query: 71  LNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDTP-VIAITGSNGKSTVTDL 129
            +A +VVT+  I    PE++  L   +PV+   E+ A  +     +AI G++GK+T T +
Sbjct: 66  GDAAVVVTSTAIKRGNPEVELALENRVPVIRRAEMLAELMRLKSTVAIAGTHGKTTTTSM 125

Query: 130 SGVLANAAGVKAAV--GGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKA--AAFL 185
              L +A GV   V  GG I     +    + +  V+E         S L+L    A   
Sbjct: 126 VAALLDAGGVDPTVINGGIINSYGSNARLGNSDWMVVEADE---SDGSFLRLDGTIAVVT 182

Query: 186 NLSEDHMDRYQGMEDYRQAKLRIFDH-----AETAVVNADDTQTFPDHAAHLQVVTFGVE 240
           N+  +H+D Y   +  + A +   ++     A    ++  + Q         ++VT+G  
Sbjct: 183 NIDPEHLDHYGSFDAVKDAFVEFVENVPFYGAAMLCLDHPEVQAILPRVQDRRIVTYGFS 242

Query: 241 QAAQFSLAQHQ----GREY---LFARDEAV--MACAELSLVGRHNVANVLTVLALLDSAG 291
             A       Q    G  +   +  RD A   +   EL + GRHNV N +  + +    G
Sbjct: 243 AQADIRGENVQPVPGGNRFDVQIRERDGATRRIEGIELPMPGRHNVLNAMAAIGVALQMG 302

Query: 292 VNFRLALDALKSYTGLTHRCQVVAD 316
           ++          + G+  R   V +
Sbjct: 303 IDDATIQTGFAKFGGVKRRFTKVGE 327