Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., UDP-N-acetylmuramate--L-alanine ligase from Pseudomonas putida KT2440

 Score = 68.2 bits (165), Expect = 6e-16
 Identities = 88/359 (24%), Positives = 145/359 (40%), Gaps = 34/359 (9%)

Query: 5   MDRWQGIQHVVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVALHRSG 64
           M R + I  V + G+G+ G++ V     Y  S +       +A P  E+L S  A    G
Sbjct: 13  MGRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGS-----DLKASPVTERLESFGAEIFVG 67

Query: 65  WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVD-TPVIAITGSNGK 123
              E    AD++V +  I  A PE+   L   IPVV   E+ A  +     +A+ G++GK
Sbjct: 68  HRAENAATADVLVVSSAINPANPEVATALERRIPVVPRAEMLAELMRYRHGVAVAGTHGK 127

Query: 124 STVTDLSGVLANAAGVKA--AVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKA 181
           +T T L   +  A G+     +GG +     +        Y++  +     +   L+   
Sbjct: 128 TTTTSLLASVFAAGGLDPTFVIGGRLTAAGTN-AQLGTSRYLIAEADESDASFLHLQPMV 186

Query: 182 AAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAET------AVVNADD---TQTFPDHAAHL 232
           A   N+  DHM  Y+G  D+ + K    +          AV+  DD    +  P      
Sbjct: 187 AVVTNIDADHMATYEG--DFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPQ--VKR 242

Query: 233 QVVTFGVEQAAQFSL--AQHQGREYLFA---RDEAVMACAELSLVGRHNVANVLTVLALL 287
             VT+G  + A       + QG +  F    RD   +    +++ G HNV N L  +A+ 
Sbjct: 243 PTVTYGFSEEADIRAINVRQQGMQTHFTVLRRDREPLE-VSVNMPGNHNVLNALATIAIA 301

Query: 288 DSAGVNFRLALDALKSYTGLTHRCQVV----ADNHGIKWVND--SKATNVASTLAALSG 340
              G+     +  L  + G+  R QV      +   +  V+D     T VA+ + A+ G
Sbjct: 302 TDEGITDEAIVQGLSGFQGVGRRFQVYGELPVEGGSVMLVDDYGHHPTEVAAVIKAVRG 360