Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Pseudomonas putida KT2440

 Score =  332 bits (852), Expect = 1e-95
 Identities = 196/440 (44%), Positives = 259/440 (58%), Gaps = 14/440 (3%)

Query: 12  QHVVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSD---VALHRSGWNLE 68
           Q  +VVGLG +G+S+V +L      +   V DTRE PP  E L  D   V +     +++
Sbjct: 10  QFRIVVGLGKSGMSLVRFLASR--GIAFAVADTREQPPELETLRRDYPQVEVRCGELDVD 67

Query: 69  WLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDTPVIAITGSNGKSTVTD 128
           +L  A+ +  +PG+ALATP +QQ  A G+ + GDIELFA H   P++AI+GSN KSTVT 
Sbjct: 68  FLCRANELYVSPGLALATPALQQAAARGVKLSGDIELFARHAKAPIVAISGSNAKSTVTT 127

Query: 129 LSGVLANAAGVKAAVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKAAAFLNLS 188
           L G +A  AG + AVGGN+G PALDL++ D+ELYVLELSSFQLETT  L  + A  LN+S
Sbjct: 128 LVGEMAAKAGKRVAVGGNLGTPALDLLADDIELYVLELSSFQLETTDQLNAEVATVLNIS 187

Query: 189 EDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAHLQVVTFGVE--QAAQFS 246
           EDHMDRY G+  Y  AK RIF  A   VVN  D  + P         TFG+       F 
Sbjct: 188 EDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRPCWTFGLNPPDFKAFG 247

Query: 247 LAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTG 306
           L +  G +YL    + +M   EL + G HN +N L  LAL  +AG+ F   L+AL+ + G
Sbjct: 248 LREVDGEKYLAFEFQTLMPARELKVRGAHNQSNALAALALGHAAGLPFEPMLEALREFGG 307

Query: 307 LTHRCQVVADNHGIKWVNDSKATNVASTLAALSGL--KIEGQLYLLVGGVGKGADFTPLA 364
           L HRCQ V + +G+ W +DSKATNV + LAA+ GL   IEG+L L+ GG GKGA+FT L 
Sbjct: 308 LAHRCQWVRERNGVNWYDDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAEFTALR 367

Query: 365 PVLATLPVQLCCFGVDGHQFM----PLHPSARFYDSMESIIRSIRPQLKSGDMVLLSPAC 420
             +      +   G D  +         P  R   +++  ++      ++GD VLLSPAC
Sbjct: 368 EPVKRFCRAVVLLGRDAERLAEALGDAVPLVR-VKTLDDAVQQCAELAQAGDAVLLSPAC 426

Query: 421 ASFDQFKNFMARGDIFAQLA 440
           AS D FKNF  RG +FAQ A
Sbjct: 427 ASLDMFKNFEERGRLFAQAA 446