Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase (EC 6.3.2.13) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 73/254 (28%), Positives = 108/254 (42%), Gaps = 55/254 (21%)

Query: 114 VIAITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGVP-------------ALDLISPDVE 160
           ++AITG+NGK++    +  L +   +  AV G +G+              A  L +PD  
Sbjct: 104 MVAITGTNGKTSTAWWTAQLLSFCAMPCAVVGTLGMGRPPRPGQADSPLVATGLTTPDPV 163

Query: 161 LYVLELSSF--------QLETTS---------SLKLKAAAFLNLSEDHMDRYQGMEDYRQ 203
           +   EL  F         +E +S         + +L+ A F N ++DH+D +  ME Y  
Sbjct: 164 MLQAELRRFVDSGLKACAVEASSIGIVEGRLNATQLRVAVFTNFTQDHLDFHGSMEAYWT 223

Query: 204 AKLRIFD--HAETAVVNADDTQTFPDHAAHLQVVTFGVEQAAQFSLAQHQGREYLFARD- 260
           AK  +FD     +AVVN DD +   D AA L     G++       A H GR  LFA+D 
Sbjct: 224 AKAELFDWPGLASAVVNIDDARG-ADLAATL--AQRGLDLWTVAIEAGHHGRARLFAQDL 280

Query: 261 -------------------EAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDAL 301
                                      L LVGR+NV+N+L VLA   + GV    A+ A 
Sbjct: 281 SFTHSGMALQVGERDARGRTLAQHALSLPLVGRYNVSNLLCVLASARALGVALADAVQAC 340

Query: 302 KSYTGLTHRCQVVA 315
            + T +  R +  A
Sbjct: 341 AALTPVPGRMEQAA 354