Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Magnetospirillum magneticum AMB-1

 Score =  184 bits (467), Expect = 5e-51
 Identities = 154/464 (33%), Positives = 218/464 (46%), Gaps = 54/464 (11%)

Query: 12  QHVVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVALHRSGWNLEWLL 71
           + V+V+GLG +G +    L        V   D  EA     +  ++  +     +L  L 
Sbjct: 10  KRVLVMGLGKSGTATARALLA--AGAGVMAWDDGEAA---RKSGAEAGIPIRDPSLLPLD 64

Query: 72  NADLVVTNPGIALATPE----IQQVLAAGIPVVGDIELFAWHVD-TPVIAITGSNGKSTV 126
            ADL+V +PGI    P+     ++  AA +P+V D+EL A  +    ++A+TG+NGKST 
Sbjct: 65  KADLLVWSPGIPHTHPQPHPLAEKARAANLPMVCDVELLAQALPGARMLAVTGTNGKSTT 124

Query: 127 TDLSGVLANAAGVKAAVGGNIGVPALDLIS-PDVELYVLELSSFQLETTSSLKLKAAAFL 185
           T L   + +  G+  A GGN+G  ALDL   P    YVLELSS+QLE T SLKL  A  L
Sbjct: 125 TTLLAHVLDECGLPVAAGGNLGTAALDLPELPGDGRYVLELSSYQLELTHSLKLGVAILL 184

Query: 186 NLSEDHMDRYQGMEDYRQAKLRIFDHAE---TAVVNADDTQTFPDHAA----HLQVVTFG 238
           N++ DH+ R+ GM  Y  AK R+FD       AVV  DD       A      ++VV   
Sbjct: 185 NVTPDHLGRHGGMAGYIAAKRRVFDFLTPGGAAVVGIDDGPCRAIVAELDRRGIRVVKIS 244

Query: 239 VEQAAQFSLAQHQGREYLFARDEAVMAC---AELSLVGRHNVANVLTVLALLDSAGVNFR 295
           V+      ++  +G       D A   C      SL GRHN  N   V A   + G++ +
Sbjct: 245 VDSVLAEGVSAPEG----VLLDNAKPVCDLKTIPSLPGRHNWQNACAVYAAARAEGLSPK 300

Query: 296 LALDALKSYTGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIEGQLYLLVGGVG 355
               AL +Y GL HR ++V ++HGI W+NDSKATN     A    L     +Y ++GG  
Sbjct: 301 QIAQALATYPGLAHRQELVGEDHGIAWINDSKATNAD---AVEKALVCYDHVYWILGGQA 357

Query: 356 KGADFTPLAPVLATLPVQLCCFGVDGHQFMPLHPSARFYDSMESIIRSIR---------- 405
           K      L             FG   H F+    +  F  +++  +R  R          
Sbjct: 358 KEGGIASLEK----------HFGRIQHAFLIGEATEAFAATLDGKVRFTRCATLDKAVAA 407

Query: 406 ------PQLKSGDMVLLSPACASFDQFKNFMARGDIFAQLARQY 443
                      G +VLLSPACAS+DQF +F  RGD F +L + +
Sbjct: 408 ARNLAVSDSIPGAVVLLSPACASWDQFTSFEHRGDTFRELVQAF 451