Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Magnetospirillum magneticum AMB-1

 Score = 65.1 bits (157), Expect = 5e-15
 Identities = 75/247 (30%), Positives = 104/247 (42%), Gaps = 41/247 (16%)

Query: 107 AWHVDTPVI--AITGSNGKSTVTDLSGVLANAAGVKAAVGGNIGV--PALD----LISPD 158
           A+H   P +  A+TG+NGK++  +    +    G  AA  G +G+  P  D    L +PD
Sbjct: 85  AFHGAQPRVMTAVTGTNGKTSTAEFFRQIMARLGHAAAAIGTLGITAPGWDNQGGLTTPD 144

Query: 159 ---------------VELYVLELSSFQLET--TSSLKLKAAAFLNLSEDHMDRYQGMEDY 201
                          V    +E SS  L+      ++L AAAF NL+ DH+D +  M  Y
Sbjct: 145 PAGLHADLARLAEMGVTHACMEASSHGLDQHRLDGVRLMAAAFTNLTRDHLDYHADMNAY 204

Query: 202 RQAKLRIF----DHAETAVVNADDTQTFPDHAAHL------QVVTFGVEQAAQFSLAQHQ 251
            +AKLR+F        TAV+NAD        A  L       V+ FG   A    L + +
Sbjct: 205 AEAKLRLFAEVLPEGATAVINAD--SDLAPRAVELCAKRGITVLGFG-RTARDLRLIEAR 261

Query: 252 GREYLFARDEAVMACA---ELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLT 308
                   D  +M  A    L L GR    N L  L L  + G +   AL+AL    G+ 
Sbjct: 262 PTAAGQELDLEIMGRAVTIRLPLAGRFQADNALAALGLALACGADPVAALEALGHLDGVP 321

Query: 309 HRCQVVA 315
            R Q VA
Sbjct: 322 GRLQQVA 328