Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Alteromonas macleodii MIT1002

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 76/276 (27%), Positives = 117/276 (42%), Gaps = 42/276 (15%)

Query: 109 HVDTPVIAITGSNGKSTVTDLSGVLANAAGVKAAVGGN----IGVP-ALDLISPDVELYV 163
           +V    IAITGS+GK+TV ++   +    G   A  GN    IGVP  L  + P  E  V
Sbjct: 99  YVAPKTIAITGSSGKTTVKEMCAAILERRGNVLATNGNFNNDIGVPLTLLRLEPQHEYAV 158

Query: 164 LELSSFQL----ETTSSLKLKAAAFLNLSEDHMDRYQGMEDYRQAKLRIFDHAET---AV 216
           +EL +  +     TT+ +K   A  +N +  H++ +  +    +AK  IF    +   AV
Sbjct: 159 MELGANHIGEIAYTTNLVKPDVATIVNAAASHLEGFGSLLGVARAKSEIFKGLGSDGVAV 218

Query: 217 VNADD--------------TQTFP-----DHAAHLQVVTFGVEQAAQFSLAQHQGREYLF 257
           VN D               T TF      D     + +T G++  A F L   +G     
Sbjct: 219 VNVDSQFAEFWQGKLKQTKTLTFSPQQKNDADFRAEDITIGLDGCAAFHLVCPRG----- 273

Query: 258 ARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSYTGLTHRCQVVADN 317
             D ++    +L++ G HNV N L   AL    G       D L +   ++ R  V    
Sbjct: 274 --DMSI----QLTIPGVHNVGNALVAAALTLQVGATLENVRDGLLAMKQVSGRLNVKQLT 327

Query: 318 HGIKWVNDSKATNVASTLAALSGLKIEGQLYLLVGG 353
             ++ ++D+   NVAS  AA+  L     + +LV G
Sbjct: 328 EQVRLLDDTYNANVASVNAAIDTLSSFSGIRVLVLG 363