Pairwise Alignments

Query, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Agrobacterium fabrum C58

 Score =  183 bits (464), Expect = 1e-50
 Identities = 140/456 (30%), Positives = 206/456 (45%), Gaps = 42/456 (9%)

Query: 14  VVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVALHRSGWNLEWLLNA 73
           V + GLG +GL     L     +V     +       Q +  +   LH   W+     + 
Sbjct: 12  VALFGLGGSGLVTARALVAGGAAVVAFDDNPDSVAKAQAEGIATADLHTIDWS-----SF 66

Query: 74  DLVVTNPGIALATPE----IQQVLAAGIPVVGDIELFAWH-----VDTPVIAITGSNGKS 124
              V  PG+ L  P+    +    AAG+ V+GDIELF         D P IAITG+NGKS
Sbjct: 67  SSFVLAPGVPLTHPKPHWSVDLAKAAGVEVIGDIELFIRERRVHAPDCPFIAITGTNGKS 126

Query: 125 TVTDLSGVLANAAGVKAAVGGNIGVPALDLISPDVE-LYVLELSSFQLETTSSLKLKAAA 183
           T T L   +  ++G    +GGNIG   L L  P  +  YV+E SS+Q++   ++   A  
Sbjct: 127 TTTALIAHILQSSGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTINPTAGI 186

Query: 184 FLNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTF------------PDHAAH 231
            LNL+ DH+DR+  M+ Y   K R+   + TA+V  DD+ +              +  + 
Sbjct: 187 LLNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSHSTLIADRIERAGVKVERISK 246

Query: 232 LQVVTFGVEQAAQFSLAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAG 291
             VV+ G+       L  H G   L    + +      +L G HN  N    +A   + G
Sbjct: 247 RNVVSEGLYAEGSQILRAHGGTSSLLVDLDGIQ-----TLRGSHNAQNAAAAIAACLAVG 301

Query: 292 VNFRLALDALKSYTGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIEGQLYLLV 351
           V+       LKS+ GL HR Q V     + +VNDSKATN  +   ALS      ++Y + 
Sbjct: 302 VSEEEIRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSF---DRIYWIA 358

Query: 352 GGVGKGADFTPLAPVLATLPVQLCC------FGVDGHQFMPLHPSARFYDSMESIIRSIR 405
           GG+ K    T L+P+   +            F     + +P   S     +++       
Sbjct: 359 GGLPKAGGITSLSPLFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADAE 418

Query: 406 PQLKSGDMVLLSPACASFDQFKNFMARGDIF-AQLA 440
               +G++V+LSPACASFDQ+KNF  RGD F AQ+A
Sbjct: 419 KDATAGNVVMLSPACASFDQYKNFEIRGDSFVAQVA 454