Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Rhodanobacter sp000427505 FW510-R12

 Score =  140 bits (354), Expect = 7e-38
 Identities = 118/454 (25%), Positives = 206/454 (45%), Gaps = 59/454 (12%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA---VTDRLADKGATIFIGHEAHNVAH 81
           +H +GI G  M G+A +    G+ + GSD  AN    ++ +L   G  +  G+ A ++  
Sbjct: 3   LHILGICGTFMGGVAALARELGHAVEGSD--ANVYPPMSTQLEALGIGLMSGYTARHLQP 60

Query: 82  A-SVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTTTTAL 139
           A  +VVV  A++  NP ++   + R+  +   + L E ++  R  +AVAGTHGKTTTT+L
Sbjct: 61  APDLVVVGNAMSRGNPAVEYMLDARLRYISGPQWLGETVLADRDVLAVAGTHGKTTTTSL 120

Query: 140 VTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRI-------------------------- 173
           +  +   AG+ P F+ GG+  + G +ARLG  +                           
Sbjct: 121 LAHLLESAGMAPGFLVGGVPGNFGVSARLGGRQAYAGPGPSSGAARHLPPEGEGSVVPPM 180

Query: 174 ---LIAEADESDASF-------LHLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHN 223
               + EADE D +F       +H +P + I+ N+E DH D +  D   +++ F   +  
Sbjct: 181 AAPFVIEADEYDTAFFDKRSKFVHYRPRIAILNNLEYDHADIF-PDVAAIQRQFHHLVRT 239

Query: 224 LPFYGQAILCIDDPVIRELIPR-VSRQVITYGFSEDADVRIENYRQNGQQGQFTVVRKGK 282
           +P  G+ I+   D  + E++       V ++G     D + E    +G    F V   G+
Sbjct: 240 VPGNGRLIVNAHDERLAEVLAMGCWTPVESFGIG-TGDWQAELIEADG--SAFRVTHHGE 296

Query: 283 ANLDITLNIPGRHNALNAAAAIAVATEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNG 342
              ++  ++ G+H+ +NA AA+A A       + +L A A+ +   RR + +GE    NG
Sbjct: 297 GVGEVRWSLLGQHSVMNALAALAAAAVAGADPQVLLPAFASFESVKRRMELVGEV---NG 353

Query: 343 VAMLVDDYGHHPTEVDVTIKAARNGWAEKRLVMIFQPHRYTRTRDLY-DDFANVLEQVDV 401
           V  + DD+ HHPT +  T+   R      R+++  +P   +  +  + +  A  L   D 
Sbjct: 354 V-RVYDDFAHHPTAIATTLAGLRAKVGSARILVALEPRSNSMRQGAHAEALAPSLADADA 412

Query: 402 LIMLDVYAAGEKPIAGADGRSLCRTIRSRGKIDP 435
           ++ L       +P    D   +   +  RG   P
Sbjct: 413 VVFL------HRPELSWDAGRVTAALGGRGATAP 440