Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Pseudomonas simiae WCS417

 Score =  140 bits (352), Expect = 1e-37
 Identities = 99/368 (26%), Positives = 181/368 (49%), Gaps = 24/368 (6%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA---VTDRLADKGATIFIGHEAHNVAH 81
           IH +GI G  M  +A +    G+ ++GSD  AN    ++ +L  +G  +  G++      
Sbjct: 3   IHILGICGTFMGSMAVLAKELGHHVTGSD--ANVYPPMSTQLEAQGIELTQGYDPSQFDP 60

Query: 82  A-SVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTTTTAL 139
              +VV+  A++  NP ++    K +P V   + LA+ +++ R  +AVAGTHGKTTT+++
Sbjct: 61  VPDLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVLQGRWVLAVAGTHGKTTTSSM 120

Query: 140 VTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDAS-------FLHLQPMV 192
           +  +   AG+ P F+ GG+ ++   +ARLG +   + EADE D++       F+H +P  
Sbjct: 121 LAWVLEHAGMSPGFLIGGVPQNFSVSARLGDTPFFVIEADEYDSAFFDKRSKFVHYRPRT 180

Query: 193 TIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPR-VSRQVI 251
            I+ N+E DH D +  D   +++ F   +  +P  G  I    +P ++ +I       V 
Sbjct: 181 AILNNLEFDHADIF-PDLAAIERQFHHLVRTIPSEGLVIHPTTEPALQRVIEMGCWTPVQ 239

Query: 252 TYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAVATEDD 311
           T G      V++     +     F V+ +G+    +  ++ G+HN  NA   +A A    
Sbjct: 240 TTGAGGQWQVKL----LSDDGSTFEVLFEGQTQGIVEWDMTGQHNVANALVTLAAARHVG 295

Query: 312 IRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEK 371
           +     + A++  +   RR + + +    NGV  + DD+ HHPT +  T+   R    + 
Sbjct: 296 VVPSMGIAALSAFKSVKRRMEKVADV---NGVT-IYDDFAHHPTAIATTLDGLRKRVGDA 351

Query: 372 RLVMIFQP 379
            ++ I +P
Sbjct: 352 PIIAIVEP 359