Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) from Variovorax sp. SCN45

 Score =  494 bits (1272), Expect = e-144
 Identities = 249/461 (54%), Positives = 320/461 (69%), Gaps = 6/461 (1%)

Query: 22  VKAIHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANAVTDRLADKGATIFIGHEAHNVAH 81
           ++ IHF+GIGG+GMSGIAEVLLN GY+ISGSDLA +A   RLA  G   F+GH A ++  
Sbjct: 5   IRHIHFVGIGGSGMSGIAEVLLNLGYKISGSDLADSATLRRLAGLGIGTFVGHAAAHIEG 64

Query: 82  ASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGIAVAGTHGKTTTTALVT 141
           A  VV STA+   NPE+ AAREKRIP+V RA MLAELMR + GIA+AGTHGKTTTT+LV 
Sbjct: 65  ADAVVTSTAVQPDNPEVLAAREKRIPVVPRALMLAELMRLKQGIAIAGTHGKTTTTSLVA 124

Query: 142 QIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDASFLHLQPMVTIVTNIEAD 201
            + + AGLDPTFV GG + SAG NA+LGS   ++ EADESDASFL+L P++ +VTNI+AD
Sbjct: 125 SVLAAAGLDPTFVIGGRLNSAGANAQLGSGDYIVVEADESDASFLNLLPVMAVVTNIDAD 184

Query: 202 HMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPRVSRQVITYGFSEDADV 261
           HM+TYG DF  LK+ F+DFLH +PFYG AILC DDP +RE++  V+  V +YGF EDA V
Sbjct: 185 HMETYGHDFAKLKKAFVDFLHRMPFYGVAILCTDDPAVREIVSSVTCPVTSYGFGEDAQV 244

Query: 262 RIENYRQNGQQGQFTVVRKGKA---NLDITLNIPGRHNALNAAAAIAVATEDDIRDEAIL 318
           R  + R  G Q  FT  R+      +L I LN+PG HN  NA + IAVA E  I DEA+ 
Sbjct: 245 RALDVRAVGGQMHFTAQRRNGVTLPDLPIVLNLPGEHNVRNALSVIAVAVELGIPDEAVQ 304

Query: 319 RAMANTQGTGRRFDHLGEFETGNGVA---MLVDDYGHHPTEVDVTIKAARNGWAEKRLVM 375
           R +A  +G GRRF   G+     G A    ++DDYGHHP E+  TI AAR  + ++RLV+
Sbjct: 305 RGLAGFKGVGRRFQSYGDVAVQGGDAGTFTVIDDYGHHPVEMAATIAAARGAFPDRRLVL 364

Query: 376 IFQPHRYTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCRTIRSRGKIDP 435
            FQPHRYTRTRD ++DF  V+   D +++ +VYAAGE PI  ADGR+L R +R  GK++P
Sbjct: 365 AFQPHRYTRTRDCFEDFVKVIGTADAVLLGEVYAAGEAPIVAADGRTLARALRVAGKVEP 424

Query: 436 IFVPDSQTLPSVLANILQDGDLVLTQGAGDVGKVARHLAAL 476
           +FV D   +P  + +  + GD+VL+ GAG +G V   +  L
Sbjct: 425 VFVDDIAAMPQAILDNARPGDVVLSMGAGSIGAVPAKVVEL 465