Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) from Variovorax sp. SCN45

 Score =  150 bits (380), Expect = 7e-41
 Identities = 102/383 (26%), Positives = 181/383 (47%), Gaps = 32/383 (8%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA-VTDRLADKGATIFIGHEAHNVAHA- 82
           IH +GI G  M G+A +    G++++G D      ++D+L   G  +  G  A  +  + 
Sbjct: 3   IHILGICGTFMGGLAALAREAGHRVTGCDAGVYPPMSDQLRSLGIDLIEGFGAEQLKLSP 62

Query: 83  SVVVVSTAINEQN--------PEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGK 133
            + V+   ++           P ++A  +   P     + LAE +++ RH +AVAGTHGK
Sbjct: 63  DMFVIGNVVSRARLPDGSPKFPLMEAILDAGKPYTSGPQWLAEHVLQGRHVLAVAGTHGK 122

Query: 134 TTTTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESD-------ASFL 186
           TTTT+++  +  + G  P F+ GG+    G +ARLG     + EADE D       + F+
Sbjct: 123 TTTTSMLAWVLEKGGKAPGFLVGGVPLDFGVSARLGDGTAFVIEADEYDTAFFDKRSKFV 182

Query: 187 HLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPR- 245
           H +P   ++ N+E DH D +  D   +++ F   +  +P  G+ ++   +  +R ++ + 
Sbjct: 183 HYRPRTAVLNNLEFDHADIF-DDLAAIERQFHHLVRTVPSTGRLVVNATEESLRHVLSQG 241

Query: 246 VSRQVITYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIA 305
              ++  +G   +       ++  G    F V+R+G+    +   + G HN +NA AAIA
Sbjct: 242 CWSELARFGAGGE-------WQARGSHDAFDVLRQGEVIGRVEWELSGLHNQMNALAAIA 294

Query: 306 VATEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAAR 365
            A    +      RA+ + +   RR +  G  E   G   + DD+ HHPT +  T+   R
Sbjct: 295 AADHVGVPPAEAARALGSFRNVRRRMELRGTVERSGGSITVYDDFAHHPTAIRTTLDGLR 354

Query: 366 N-----GWAEKRLVMIFQPHRYT 383
           N     G   +R++  F+P   T
Sbjct: 355 NKLDAAGKKSERILAAFEPRSNT 377