Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Variovorax sp. OAS795

 Score =  150 bits (380), Expect = 7e-41
 Identities = 106/383 (27%), Positives = 181/383 (47%), Gaps = 32/383 (8%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA-VTDRLADKGATIFIGHEAHNVAHA- 82
           IH +GI G  M G+A +    G++++G D      ++D+L   G  +  G  A  +A A 
Sbjct: 3   IHILGICGTFMGGVAALAREAGHRVTGCDAGVYPPMSDQLRSLGIDLIEGFAADQLALAP 62

Query: 83  SVVVVSTAINEQN--------PEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGK 133
            + VV   ++           P ++A  +   P     + LAE ++  RH +AVAGTHGK
Sbjct: 63  DMFVVGNVVSRARLPDGTPKFPLMEAILDAGRPYTSGPQWLAEHVLAGRHVMAVAGTHGK 122

Query: 134 TTTTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESD-------ASFL 186
           TTTT+++  +  + G  P F+ GG+    G +AR G     + EADE D       + F+
Sbjct: 123 TTTTSMLAWVLEQGGKAPGFLVGGVPLDFGVSARSGGGAPFVIEADEYDTAFFDKRSKFV 182

Query: 187 HLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAIL-CIDDPVIRELIPR 245
           H +P   I+ N+E DH D +  D   +++ F   +  +P  G+ ++   ++ + R L   
Sbjct: 183 HYRPRTAILNNLEFDHADIF-DDLAAIERQFHHLVRTVPGTGRLVVNATEESLQRVLAQG 241

Query: 246 VSRQVITYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIA 305
              ++  +G   +       ++  G    F V+R+G+A   +   + G HN +NA AAIA
Sbjct: 242 CWSELARFGAGGE-------WQARGSHDAFDVLRQGEAVGRVEWELSGLHNQMNALAAIA 294

Query: 306 VATEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAAR 365
            A    +      RA+ + +   RR +  G  E  +G   + DD+ HHPT +  T+   R
Sbjct: 295 AAEHVGVAPADAARALGSFRNVRRRMELRGTVERRDGAITVYDDFAHHPTAIRTTLDGLR 354

Query: 366 N-----GWAEKRLVMIFQPHRYT 383
                 G  ++R++  F+P   T
Sbjct: 355 KKLDAAGKKDERILAAFEPRSNT 377