Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase (EC 6.3.2.10) from Sphingobium sp. HT1-2

 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 29/322 (9%)

Query: 165 NARLGSSRILIAEADESDASFLHLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNL 224
           +A  G   + +  A E  A    ++P V IVT I   H++ +G + E + +   +    L
Sbjct: 151 DAAYGVFEMGMNHAGELAALTRQVRPNVAIVTAIAPAHIEFFGTE-EKIAEAKAEIFEGL 209

Query: 225 PFYGQAILCIDDPVIRELIPRVSRQ---VITYGFSEDADVRIENYRQNGQQGQFTVVRKG 281
              G A++  D P +  L  +  R    ++T+GFS +AD+ + +       G        
Sbjct: 210 EPGGTAVIPYDSPHVATLYGKAERHADHILTFGFSPEADIFVRDTVPAPGGGTLVTAALP 269

Query: 282 KANLDITLNIPGRH---NALNAAAAIAVATEDDIRDEAILRAMANTQGTGRRFDHLGEFE 338
              L  T+  PG H   N+L   AA+     D       L  M    G G R        
Sbjct: 270 GVELCFTVGAPGDHWVSNSLAVLAAVEALGGDLAAAGLALAEMPGLPGRGAR----RILP 325

Query: 339 TGNGVAMLVDD-YGHHPTEVDVTIKAARNGWAEKRLVMIFQPHRY-TRTRDLYDDFANVL 396
              G A+L+D+ Y  +P  +  T+K      A++R+ ++       +R+ +L+   +  L
Sbjct: 326 VAGGEALLIDESYNANPLSMAATLKQLGREQADRRIAVLGGMRELGSRSTELHAALSQPL 385

Query: 397 EQ--VDVLIMLDVYAAGEKPIAGADGRSLCRTIRSRGKIDPIFVPDSQTLPSVLANILQD 454
            +  VD  I++    A   P+A A G          G +    VPD+ +   ++   ++ 
Sbjct: 386 SENGVDYAILVGEEMA---PLADALG----------GLVAFDHVPDAASATDLINKEMRA 432

Query: 455 GDLVLTQGAGDVGKVARHLAAL 476
           GD +L +G+  +G ++R +AAL
Sbjct: 433 GDAILVKGSNGIG-LSRLVAAL 453