Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  152 bits (383), Expect = 3e-41
 Identities = 105/380 (27%), Positives = 181/380 (47%), Gaps = 28/380 (7%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA-VTDRLADKGATIFIGHEAHNVA-HA 82
           IH +GI G  M G+A +    G++++G D      ++D+L   G  +  G  A  +A   
Sbjct: 3   IHILGICGTFMGGVAALAREAGHRVTGCDAGVYPPMSDQLRALGIDLIEGFGADQLALRP 62

Query: 83  SVVVVSTAINEQN--------PEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGK 133
            + VV   ++           P ++A  +         + LAE +++ RH +AVAGTHGK
Sbjct: 63  DMFVVGNVVSRARLADGTPKFPLMEAIMDSGAAYTSGPQWLAEHVLQGRHVMAVAGTHGK 122

Query: 134 TTTTALVTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESD-------ASFL 186
           TTTT ++T I    GL P F+ GG+  + G +ARLG  +    EADE D       + F+
Sbjct: 123 TTTTGMLTWILEANGLQPGFLIGGVPMNFGVSARLGQGQTFTIEADEYDTAFFDKRSKFV 182

Query: 187 HLQPMVTIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAIL-CIDDPVIRELIPR 245
           H +P   I+ N+E DH D +  D   +++ F   +  +P  G+ ++  +++ + R L   
Sbjct: 183 HYRPRTAILNNLEFDHADIF-DDLAAIERQFHHLIRTVPGNGRVVVNGLEESLERVLHKG 241

Query: 246 VSRQVITYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIA 305
           +  ++ ++G        + ++   G+   F V+ +G+    +   + G HN LN  AAIA
Sbjct: 242 LWSELRSFG------AAVSDFTAQGEPHAFDVLHQGQPAGRVEWALTGVHNQLNGLAAIA 295

Query: 306 VATEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAAR 365
            A    +      RA++N +   RR +  G      G   + DD+ HHPT +  T+   +
Sbjct: 296 AAEHVGVAPADAARALSNFENVRRRMEVRGTVPRAGGAITVYDDFAHHPTAIRTTLDGLQ 355

Query: 366 N--GWAEKRLVMIFQPHRYT 383
              G    R++ +F+P   T
Sbjct: 356 RKLGQPRGRILAVFEPRSNT 375