Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Erwinia tracheiphila SCR3

 Score =  138 bits (347), Expect = 5e-37
 Identities = 122/469 (26%), Positives = 220/469 (46%), Gaps = 46/469 (9%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA---VTDRLADKGATIFIGHEAHNVAH 81
           IH +G+ G  M G+A +    G++++GSD  AN    ++  L  +G  +  G+++  +  
Sbjct: 3   IHILGVCGTFMGGLAVLARALGHEVTGSD--ANVYPPMSTLLEQQGIELIQGYDSSQLDP 60

Query: 82  A-SVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTTTTAL 139
           A  +V++  A+   N  ++A  E+ IP +   + L + +++ R  +AVAGTHGKTTT  +
Sbjct: 61  APDLVIIGNAMARGNACVEAVLERNIPYLSGPQWLHDFVLKDRWVLAVAGTHGKTTTAGM 120

Query: 140 VTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDAS-------FLHLQPMV 192
           V  I   +GL+P FV GG+  +   +A  G+S   + EADE D++       F+H  P  
Sbjct: 121 VAWILQASGLEPGFVIGGVPGNFSVSATPGNSPFFVIEADEYDSAFFDKRSKFVHYCPRT 180

Query: 193 TIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPRVSRQVIT 252
            I+ N+E DH D +  D   +++ F   +  +P  G+ ++  +D  +        +QV++
Sbjct: 181 LILNNLEFDHADIF-DDLRAIQRQFHHLIRIVPESGRILVPENDGNL--------KQVMS 231

Query: 253 YG-FSEDADVRIENYRQNGQQGQ----FTVVRKGKANLDITLNIPGRHNALNAAAAIAVA 307
            G +SE   +    + Q  +  Q    + V   G+   ++  ++ G HN  N   AIA A
Sbjct: 232 MGCWSEVESLGEGGHWQAKKLSQDASCWEVCLDGEKVAEVNWSLVGEHNMHNGLMAIAAA 291

Query: 308 TEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNG 367
               ++ E   RA+ +     RR +  G+    +G+  + DD+ HHPT +  T+ A R+ 
Sbjct: 292 RHVGVKPEDAGRALNDFINARRRLELRGD---ASGI-KVYDDFAHHPTAILATLTALRSK 347

Query: 368 -WAEKRLVMIFQPHRYTRTRDL-YDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCR 425
                R++ + +P   T    +  DD A  L + D + +   +     P   ++    C 
Sbjct: 348 VGGTARILAVLEPRSNTMKMGISKDDLAPALARADRVFLFQPH---HIPWQVSEVADAC- 403

Query: 426 TIRSRGKIDPI-FVPDSQTLPSVLANILQDGDLVLTQGAGDVGKVARHL 473
                  + P  +  D   L  ++A   Q GD +L    G  G + + L
Sbjct: 404 -------VQPAHWSADVDVLVEMIAKTAQPGDTILVMSNGGFGGIHQKL 445