Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Dickeya dianthicola ME23

 Score =  149 bits (375), Expect = 3e-40
 Identities = 133/469 (28%), Positives = 215/469 (45%), Gaps = 46/469 (9%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA---VTDRLADKGATIFIGHEAHNVAH 81
           IH +GI G  M G+A +  ++G+Q++GSD  AN    ++  L ++G T+  G++   +  
Sbjct: 3   IHILGICGTFMGGLALLARSQGHQVTGSD--ANVYPPMSTLLEEQGITLTPGYDPAQLDP 60

Query: 82  A-SVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTTTTAL 139
           A  +VV+  A+   NP ++A  E+ IP +   + L + ++R R  IAVAGTHGKTTT  +
Sbjct: 61  APDLVVIGNAMTRGNPCVEAVLEQNIPYMSGPQWLHDHVLRERWVIAVAGTHGKTTTAGM 120

Query: 140 VTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESD-------ASFLHLQPMV 192
           VT I  + G  P FV GG+  +   +ARLG S   + EADE D       + F+H  P  
Sbjct: 121 VTWILEDCGYQPGFVIGGVPGNFSVSARLGESPFFVVEADEYDCAFFDKRSKFVHYSPRT 180

Query: 193 TIVTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPRVSRQVIT 252
            I+ N+E DH D +  D + +++ F   +  +P  G+ I+   D  +        +QV+ 
Sbjct: 181 LILNNLEFDHADIF-DDLKAIQKQFHHLVRLVPGKGRIIVPSHDLHL--------KQVMG 231

Query: 253 YG-FSEDADVRIENY----RQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAVA 307
            G +SE   V  E      +       F V        ++T N+ G HN  N   AIA A
Sbjct: 232 MGCWSEQELVGEEGIWKAKKVTTDASVFQVYLNDLLVGEVTWNLVGEHNMHNGLMAIAAA 291

Query: 308 TEDDIRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNG 367
               +      RA+       RR +  G   T   V+ + DD+ HHPT +  T+ A R+ 
Sbjct: 292 RHVGVPPAEACRALGGFINARRRLELRG---TAYRVS-VYDDFAHHPTAILATLAALRSK 347

Query: 368 -WAEKRLVMIFQPHRYT-RTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCR 425
                R++ + +P   T +     ++ A  L + D + +   +     P   A+    C 
Sbjct: 348 VGGTARILAVLEPRSNTMKMGHCKNELAPALGRADGVFL---FQPQHIPWQVAEVADAC- 403

Query: 426 TIRSRGKIDPIF-VPDSQTLPSVLANILQDGDLVLTQGAGDVGKVARHL 473
                  + P +   D  TL  +++   Q GD +L    G  G +   L
Sbjct: 404 -------VQPAYWSADIDTLVEMISKTAQPGDHILVMSNGSFGNIHNKL 445