Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Alteromonas macleodii MIT1002

 Score =  145 bits (367), Expect = 2e-39
 Identities = 122/469 (26%), Positives = 219/469 (46%), Gaps = 38/469 (8%)

Query: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANA-VTDRLADKGATIFIGH-EAHNVAHA 82
           +H +GI G+ M GIA +  + G++++GSD      ++ +L   G  +  G+ E+      
Sbjct: 3   VHILGICGSFMGGIAAIAKSLGHKVTGSDKNVYPPMSTQLEALGIELTEGYCESQFDPAP 62

Query: 83  SVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAE-LMRFRHGIAVAGTHGKTTTTALVT 141
            +VV+  A++  NP ++    + +P     + L + L++ R  I ++GTHGKTTT+++V 
Sbjct: 63  DMVVIGNAMSRGNPAVEYVLNRNLPYTSGPQWLLDNLLKDRWVIGLSGTHGKTTTSSMVA 122

Query: 142 QIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDAS-------FLHLQPMVTI 194
            I   A L+P ++ GG+ ++ G +AR+G S   + EADE D++       F+H +P   +
Sbjct: 123 WILEHASLNPGYLIGGVPENFGVSARVGESPFFVIEADEYDSAFFDKRSKFVHYRPKTLV 182

Query: 195 VTNIEADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPR---VSRQVI 251
           + N+E DH D +  D   ++  F   +  +P  G  +   + P I +++ +    SRQ  
Sbjct: 183 INNLEFDHADIF-ADLGAIQTQFHHLVRMVPENGLILTPNNTPAIEDMLKKGCWSSRQ-- 239

Query: 252 TYGFSEDADVRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAVATEDD 311
               S   +   E  +++G   +F V+  G     +T  + G+HN  NA  AIA A    
Sbjct: 240 ----SLGKEWHAELLKKDG--SKFNVLHNGVIAGTVTWALVGQHNVDNALMAIAAAHHAG 293

Query: 312 IRDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEK 371
           +     + A++  +   RR +  GE         L DD+ HHPT +  T+   R      
Sbjct: 294 VTLPDAIDALSFFKNVKRRMEVKGEVNN----ITLYDDFAHHPTAIATTLDGLRKKVGNA 349

Query: 372 RLVMIFQPHRYTRTRDLY-DDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCRTIRSR 430
           R++ + +P   T    ++ D  AN  ++ D + + +          G D  SL  ++   
Sbjct: 350 RILAVLEPRSNTMKMGVHKDTLANSWQKADEVYLYEP--------EGMDW-SLVDSVAHS 400

Query: 431 GKIDPIFVPDSQTLPSVLANILQDGDLVLTQGAGDV-GKVARHLAALEL 478
                 F  D + +   + N+ Q GD +L    G   G   R L AL++
Sbjct: 401 NAPTHCF-RDVEKIVQGVCNVAQPGDHILVMSNGGFEGIHGRILDALKM 448