Pairwise Alignments

Query, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., UDP-N-acetylmuramate-alanine ligase from Agrobacterium fabrum C58

 Score =  404 bits (1039), Expect = e-117
 Identities = 217/461 (47%), Positives = 295/461 (63%), Gaps = 13/461 (2%)

Query: 20  RRVKAIHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANAVTDRLADKGATIFIGHEAHNV 79
           + +  +HFIGIGG GMSGIAEVL N G+++ GSD A +A   RL DKG  +F+GH A N+
Sbjct: 5   KAIGLVHFIGIGGIGMSGIAEVLHNLGHRVQGSDQADSANVQRLRDKGIEVFVGHTADNL 64

Query: 80  AHASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGIAVAGTHGKTTTTAL 139
             A VVVVSTAI + NPE+ AAREK +PIVRRAEMLAELMRFR+ IA+ GTHGKTTTT++
Sbjct: 65  GDAEVVVVSTAIKKNNPELIAAREKHLPIVRRAEMLAELMRFRNAIAIGGTHGKTTTTSM 124

Query: 140 VTQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDASFLHLQPMVTIVTNIE 199
           V  +     LDPT +NGG++ + GTNAR+G    ++ EADESD +FL L   V ++TNI+
Sbjct: 125 VATLLEAGNLDPTVINGGIINAYGTNARMGEGEWMVVEADESDGTFLKLPADVAVITNID 184

Query: 200 ADHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPRV-SRQVITYGFSED 258
            +H+D Y G+F+ ++  F  F+ N+PFYG  ++C+D P ++ L+ R+  R+VITYG +  
Sbjct: 185 PEHLDHY-GNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQALVGRIEDRKVITYGENPQ 243

Query: 259 ADVRIENYRQNGQQGQFTVV----RKGK--ANLDITLNIPGRHNALNAAAAIAVATEDDI 312
           ADVR  N R +G +  F V     R GK  +  D+ L +PGRHN  NA AAIAVA    I
Sbjct: 244 ADVRFSNVRIDGTRSIFDVEIRRRRTGKIFSFKDLVLPMPGRHNVSNATAAIAVANRLGI 303

Query: 313 RDEAILRAMANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEKR 372
            +  I + +A+  G  RRF   GE    NGV  + DDYGHHP E+   + AAR    + R
Sbjct: 304 SEADIKKGLASFAGVKRRFTLTGE---ANGV-QVFDDYGHHPVEIKAVLAAAREA-CKGR 358

Query: 373 LVMIFQPHRYTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCRTIRSRGK 432
           ++ + QPHRY+R   L+DDFA+     D +++  VYAAGE PI GA   +L   I++ G 
Sbjct: 359 IIAVHQPHRYSRLSSLFDDFAHCFNDADTILLAPVYAAGEDPIEGASSEALVSAIKAAGH 418

Query: 433 IDPIFVPDSQTLPSVLANILQDGDLVLTQGAGDVGKVARHL 473
            D  F+   + L S +A I   GD V+  GAG++ + A  L
Sbjct: 419 RDARFLEKREDLASQVAAIANPGDFVVLLGAGNITQWAAAL 459