Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 914 a.a., preprotein translocase subunit SecA from Rhodanobacter sp000427505 FW510-R12

 Score = 1059 bits (2738), Expect = 0.0
 Identities = 530/919 (57%), Positives = 683/919 (74%), Gaps = 23/919 (2%)

Query: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL 60
           M  + LT + GSRN+R LR+L K V  IN  EP FE LSD+EL+ KT  F+QR+  GE+L
Sbjct: 1   MFNRALTSLFGSRNERVLRQLSKSVNRINALEPEFEKLSDDELRGKTDVFKQRVAAGESL 60

Query: 61  DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA 120
           D+LLPEAFA VREA+KR  GMR +DVQ+IGGMVLH G+IAEMRTGEGKTL  TL  YLNA
Sbjct: 61  DKLLPEAFAVVREAAKRTLGMRPYDVQMIGGMVLHQGKIAEMRTGEGKTLVGTLPVYLNA 120

Query: 121 LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN 180
           L GKGVH+VTVNDYLA+RD+     L+ FLG+ VGV  P M    K  AY ADI YGTNN
Sbjct: 121 LAGKGVHVVTVNDYLARRDSAQMGKLYNFLGLAVGVVYPGMDHADKHAAYAADITYGTNN 180

Query: 181 EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN 240
           EFGFDYLRDNMA   E R QR   +A+VDEVDSILIDEARTPLIISGPAEDS  LYI +N
Sbjct: 181 EFGFDYLRDNMALSKEQRYQRGLHYAIVDEVDSILIDEARTPLIISGPAEDSPQLYIAVN 240

Query: 241 KLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYS 300
           K++P + +Q +E+     G+G + VDEK KQVHL+E G +  +ELL  +G++++   LY 
Sbjct: 241 KIVPQMVRQIEEN-----GEGDYWVDEKQKQVHLSEAGMQHADELLRASGVIEQDSGLYD 295

Query: 301 PANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEA 360
             N++++HH+NAALRA+ +++++VDYIV  DGEV+IVDE TGRT+PGRRWSDGLHQAVEA
Sbjct: 296 SKNLAVVHHLNAALRANGIYQRDVDYIVR-DGEVIIVDEFTGRTLPGRRWSDGLHQAVEA 354

Query: 361 KEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMV 420
           KEGV IQ ENQTLA++TFQN FR+Y+KL+GMTGTADTEAFEFQ IYGLE VVIPT+KPM+
Sbjct: 355 KEGVPIQRENQTLATVTFQNLFRMYKKLAGMTGTADTEAFEFQSIYGLEVVVIPTHKPMI 414

Query: 421 RNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVL 480
           R D PD+++ S+  K+ ++IEDI+   ++GQPVLVGT SIE SELLS  LKKAG+ H VL
Sbjct: 415 RKDNPDMIFLSQTPKYNSVIEDIRACHQRGQPVLVGTTSIEVSELLSGLLKKAGVAHEVL 474

Query: 481 NAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQE-QIDAIK 539
           NAK HE+EA IVA+AG PG VTIATNMAGRGTDIVLGGS +A + +L     E     ++
Sbjct: 475 NAKQHEREAHIVAQAGAPGQVTIATNMAGRGTDIVLGGSLEAALAELPAEAGEADRQRVR 534

Query: 540 AEWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIF 599
           AEWK++H++V+ AGGLHIIGTERHESRRIDNQLRGRSGRQGD GSSRFYLS+ED LLRIF
Sbjct: 535 AEWKKLHERVVAAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDNLLRIF 594

Query: 600 TSDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKV 658
             + +   ++  GM + +A+E +M+SR IEKAQRKVE  NFDIRK LLE+DDVANDQRKV
Sbjct: 595 GGEGLVRWMKRFGMKDDDALEDRMISRQIEKAQRKVEQHNFDIRKHLLEFDDVANDQRKV 654

Query: 659 VYELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPL 718
           +Y  RDEL+  D++   +A  R+DV+ +++  Y+P  S+++ WD+ GL+  L+++  L L
Sbjct: 655 IYRQRDELLDDDEVQATVADIRDDVVQSMVRAYVPDDSIDEQWDLAGLDRELESELGLSL 714

Query: 719 PIQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEH 778
            ++ W++  +++  + L E +     E+++AKE  +    MR  EK +ML  +D  WK+H
Sbjct: 715 DLKQWIEQQHEIDAKMLLEHVRGAVHELFQAKEAQIGAETMRQLEKHIMLTVVDNAWKDH 774

Query: 779 LAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQEEVE 838
           LA+MD+LRQGI+L GYAQ++PKQ +KRESF+LF D+LE +K++V+ +L+++R++ +EEV 
Sbjct: 775 LASMDYLRQGIYLVGYAQQDPKQAFKRESFKLFSDMLERIKAEVVQMLARIRIRSEEEVA 834

Query: 839 RMEAQRRAQAEEAARHAQAQHASAD---------------DAEQDESNQPMVRDERKVGR 883
            MEA++R  A+   +   A    A                 A    + QP   D  KVGR
Sbjct: 835 AMEAEQRRLADRLQKQMLASGGGAPTEGAFGGAVAAEAAVGASMRLAQQPAQHDGSKVGR 894

Query: 884 NEPCPCGSGKKYKQCHGQI 902
           N+PCPCGSGKKYK CHGQ+
Sbjct: 895 NDPCPCGSGKKYKHCHGQL 913