Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 928 a.a., Protein translocase subunit SecA from Variovorax sp. SCN45

 Score = 1029 bits (2661), Expect = 0.0
 Identities = 529/928 (57%), Positives = 676/928 (72%), Gaps = 27/928 (2%)

Query: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL 60
           M T  LT++ GSRNDR L++ RK V+ IN  EP FE LSDE L+AKT EF+ RI +GE +
Sbjct: 1   MATNFLTQIFGSRNDRLLKQYRKTVERINALEPEFEKLSDEALRAKTQEFKDRIAKGETV 60

Query: 61  DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA 120
           D LLPEAFATVRE SKRV  MRHFDVQL+GGM LH G+I+EMRTGEGKTLTATL  YLNA
Sbjct: 61  DALLPEAFATVREGSKRVMKMRHFDVQLLGGMALHNGKISEMRTGEGKTLTATLPVYLNA 120

Query: 121 LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN 180
           L GKGVH+VTVNDYLA RDA     L+ FLG+TVG+N+P MP+  K++AY +DI YGTNN
Sbjct: 121 LTGKGVHVVTVNDYLASRDATWMGRLYNFLGLTVGINLPQMPREEKQQAYGSDITYGTNN 180

Query: 181 EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN 240
           E+GFDYLRDNM + P DRVQR   +A+VDEVDSILIDEARTPLIISG AED +DLY+ IN
Sbjct: 181 EYGFDYLRDNMVYEPGDRVQRGLNYAIVDEVDSILIDEARTPLIISGQAEDHTDLYLAIN 240

Query: 241 KLIPLLQKQ----DKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGD 296
           K++PLL KQ    D    E     G FTVDEK+ QV LTE G E  E +L +  ++ EG 
Sbjct: 241 KVVPLLTKQEGEADPRTGEGVTVPGDFTVDEKTHQVFLTEDGHENAERILGEFKLLPEGA 300

Query: 297 TLYSPANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQ 356
           +LY PANI+L+HH+NAALRA  L+ ++  Y+V   GEVVIVDE TGR M GRRWSDGLHQ
Sbjct: 301 SLYDPANITLMHHLNAALRARHLYHRDQHYVV-QQGEVVIVDEFTGRLMTGRRWSDGLHQ 359

Query: 357 AVEAKEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTN 416
           AVEAKEGV+IQ ENQTLASITFQNYFRLY KL+GMTGTADTEA+EFQ+IYGLET++IP N
Sbjct: 360 AVEAKEGVEIQAENQTLASITFQNYFRLYGKLAGMTGTADTEAYEFQEIYGLETMIIPPN 419

Query: 417 KPMVRNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIK 476
           +   R+D  D VY++  EK+ A I+DI++  E+GQPVLVGT SIE SE++   L+KAG+ 
Sbjct: 420 RISKRDDQLDRVYKTTREKYEAAIQDIRECYERGQPVLVGTSSIENSEIIDGLLEKAGLP 479

Query: 477 HNVLNAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKL-------DN 529
           H VLNAK H +EA+IVA+AG+   +TIATNMAGRGTDIVLGG+ +  +E +       + 
Sbjct: 480 HQVLNAKQHAREADIVAQAGRTKMITIATNMAGRGTDIVLGGNIEKMIEAIEADEGRDEA 539

Query: 530 PTQEQIDAIKAEWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYL 589
             +  I+ ++AEW + H+ V   GGL II TERHESRRIDNQLRGRSGRQGD GSSRFYL
Sbjct: 540 AKKADIEHVRAEWTKDHEFVKSLGGLRIIATERHESRRIDNQLRGRSGRQGDPGSSRFYL 599

Query: 590 SMEDTLLRIFTSDRMAALI-QSGMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEY 648
           S++D L+RIF  DR+ A++ +  M +GEAIE+ +++RSIE AQRKVE RNFDIRKQLLEY
Sbjct: 600 SLDDPLMRIFAGDRVKAIMDRLKMPDGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEY 659

Query: 649 DDVANDQRKVVYELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLED 708
           DDV+NDQRKV+Y+ R++++ A D++  IA  RE     ++ +Y+P +S+E+ WD+  LE+
Sbjct: 660 DDVSNDQRKVIYQQRNDILDAGDLTAQIAGLREGCFTDLVRQYVPSESVEEQWDLAALEN 719

Query: 709 RLKNDFDLPLPIQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVML 768
            L  ++ + +P++  ++A   + +E + E++++ A E + AK   +       FE+ V+L
Sbjct: 720 TLFTEWGIDMPLKKDVEAAEAIADEDIVEKVLQHANETFDAKVALIGQENFTQFERMVLL 779

Query: 769 QTLDTLWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSK 828
           Q++DT W+EHLA++D+LRQGIHLRGYAQK PKQEYKRE+FELF  LL+S+K++V   L  
Sbjct: 780 QSIDTHWREHLASLDYLRQGIHLRGYAQKQPKQEYKREAFELFGQLLDSVKNEVTRQLMT 839

Query: 829 VRVQQQEEVERMEAQRRAQAEEAARHAQAQHASADDAE--QDESNQPMVRDE-------- 878
           VRVQ  E++E       ++ E              + E   DE +Q              
Sbjct: 840 VRVQSGEQLEEAAEALESRGENVTNITYTAPTETGEVEVRVDEESQRRAAAAGAGALSAE 899

Query: 879 ----RKVGRNEPCPCGSGKKYKQCHGQI 902
                +VGRN+PCPCGSGKKYKQCHG++
Sbjct: 900 ALAFARVGRNDPCPCGSGKKYKQCHGKL 927