Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 910 a.a., Protein translocase subunit SecA from Sphingobium sp. HT1-2

 Score =  902 bits (2332), Expect = 0.0
 Identities = 487/927 (52%), Positives = 625/927 (67%), Gaps = 41/927 (4%)

Query: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL 60
           M   L   + GS N+R ++ L K++ +I  +EP  +A+SD+EL ++T  FR+R+  GE L
Sbjct: 1   MFGALAKSIFGSSNERYVKSLGKVIDQIAAFEPTIQAMSDDELVSQTARFRERLANGETL 60

Query: 61  DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA 120
           D LLPEAFATVREAS RV GMRHFDVQ+IGG+VLH G+IAEMRTGEGKTL ATLA YLNA
Sbjct: 61  DGLLPEAFATVREASVRVLGMRHFDVQMIGGIVLHRGEIAEMRTGEGKTLVATLATYLNA 120

Query: 121 LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN 180
           L GKGVH+VTVNDYLA RD E    ++ FLG+T GV +PN+ +  ++EAY ADI Y TNN
Sbjct: 121 LEGKGVHVVTVNDYLASRDCEWMGQVYRFLGLTTGVIVPNLSEDQRREAYNADITYATNN 180

Query: 181 EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN 240
           E GFDYLRDNM F     VQR    A+VDEVDSILIDEARTPLIISGP +D S+LY+ +N
Sbjct: 181 ELGFDYLRDNMKFDRGAMVQRPFNHAIVDEVDSILIDEARTPLIISGPTDDKSELYVAVN 240

Query: 241 KLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYS 300
            ++  L ++D E             DEK + + LTE G E +E LL   G++Q G+ LY 
Sbjct: 241 AIVKQLVEEDYEK------------DEKQRTITLTEDGTEKIERLLEAAGLLQ-GNNLYD 287

Query: 301 PANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEA 360
             N  ++HHVN ALRA V+F +++DYIV  DG+VVI+DE TGR M GRRWSDGLHQAVEA
Sbjct: 288 FENTQVVHHVNQALRAVVMFRRDIDYIVK-DGKVVIIDEFTGRMMDGRRWSDGLHQAVEA 346

Query: 361 KEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMV 420
           KEGV+I+ ENQTLASITFQNYFR+Y K+SGMTGTA TEA EF +IY +  V IPTN+P+ 
Sbjct: 347 KEGVQIEPENQTLASITFQNYFRMYPKISGMTGTASTEATEFYEIYKMNVVTIPTNRPVQ 406

Query: 421 RNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVL 480
           R D  D  Y++  +KF  I   IK+  EKGQPVLVGTVSIEKSE+LS  L + G+KH VL
Sbjct: 407 RVDEEDTFYKNLEDKFRGIARTIKEHAEKGQPVLVGTVSIEKSEMLSEFLNQEGVKHAVL 466

Query: 481 NAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKL-----DNPTQEQ- 534
           NA+FHE EA IVA+AG+ GAVTIATNMAGRGTDI LGG+ + +VE       + P +E  
Sbjct: 467 NARFHESEAHIVAQAGRKGAVTIATNMAGRGTDIKLGGNLEMRVEDELRDMPEGPEREAA 526

Query: 535 IDAIKAEWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDT 594
           I  I+ E +    +VL AGGL ++ TERHESRRIDNQLRGRSGRQGD G SRFYLS++D 
Sbjct: 527 IARIEVEIEAEKQEVLAAGGLFVLATERHESRRIDNQLRGRSGRQGDPGLSRFYLSLDDD 586

Query: 595 LLRIFTSDRM-AALIQSGMDEGEAIE-SKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVA 652
           L+RIF  D M A +I+S +++GEA+  SK LS++IE AQRKVE RN+DIRKQ++EYDDV 
Sbjct: 587 LMRIFGPDTMFAKMIRSNLEDGEALPPSKWLSKAIETAQRKVEARNYDIRKQVVEYDDVM 646

Query: 653 NDQRKVVYELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKN 712
           NDQRKV+YE R ++M A+ + D++   R + +N ++    PP +  + WD++ L+ R   
Sbjct: 647 NDQRKVIYEQRSDIMDAETVDDVVTDMRHETVNDLVGASCPPGTYPEQWDMERLKLRTAE 706

Query: 713 DFDLPLPIQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLD 772
              L     +WL A++ +  E + ER+   A      K Q V  A     EKS+MLQ+LD
Sbjct: 707 VLGLEPDFDAWL-AEDAVDPEMIEERLAGLADAAIAEKTQEVEAADWHMIEKSIMLQSLD 765

Query: 773 TLWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQ 832
             WKEHL+ +D LRQ +HLR YAQK P  EYK+E+F LFE +LE+++ DV + ++  RVQ
Sbjct: 766 HHWKEHLSTLDALRQVVHLRAYAQKTPINEYKQEAFALFERMLENIREDVTSSIA--RVQ 823

Query: 833 QQEEVERMEAQRRAQAEEAARHAQAQHASADDAEQDESN----------------QPMVR 876
            + E  + +       +    H        + A+ D S                  P   
Sbjct: 824 FRMEAPQPQFDLPVLPDFITTHIDPFSGEDNSADIDGSQLAGITTTIPRAPVDNVAPGEF 883

Query: 877 DERKVGRNEPCPCGSGKKYKQCHGQIN 903
               + RN  CPCGSG+KYK CHG ++
Sbjct: 884 ANLDISRNALCPCGSGQKYKHCHGALS 910