Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 1123 a.a., preprotein translocase subunit SecA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  591 bits (1523), Expect = e-173
 Identities = 386/951 (40%), Positives = 518/951 (54%), Gaps = 181/951 (19%)

Query: 81   MRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNALPGKGVHIVTVNDYLAKRDA 140
            M H+DVQLIGG+VLH G+IAEM TGEGKTL ATL AYLNAL  +GVH+VTVNDYLA+RD+
Sbjct: 174  MLHYDVQLIGGIVLHQGKIAEMATGEGKTLVATLPAYLNALAKRGVHVVTVNDYLARRDS 233

Query: 141  ETNRPLFEFLGMTVGVNIPNMPQP-AKKEAYQADILYGTNNEFGFDYLRDNMAFRPEDRV 199
            E   PLFEF G+T+     + P   A++ AY+ADI YGTNNEFGFDYLRDNM+  P+D V
Sbjct: 234  EWMAPLFEFHGLTIDCIDRHQPNSEARRNAYKADITYGTNNEFGFDYLRDNMSREPQDLV 293

Query: 200  QRARFFAVV--------DEVDSILIDEARTP----------------------------- 222
            QR   +A+V        D+  + LI     P                             
Sbjct: 294  QRKHHYAMVDEVDSVLIDDARTPLIISGPVPRGDEHEFYQLKPRIGMLVEAQRKVVQNFL 353

Query: 223  -----LIISGPAEDSSDLYIRINKLIP----------------LLQKQDK---EDSEEYR 258
                 LI  G  +D      R  + +P                ++QK +    +D+    
Sbjct: 354  TEAKRLIKEGNTQDGGLALFRAYRGLPKSKPLIKFLSETGNRAIMQKTENFYLQDNSRQM 413

Query: 259  GDG----HFTVDEKSKQVHLTETGQEFV------------------------EELLVKNG 290
             +     +FT+DEK  Q+ LTE G + +                        +  L    
Sbjct: 414  PEADEPLYFTIDEKHNQIELTEKGIDLITGQGEDPNFFIMPDIGTEIANIDNDNSLSHEE 473

Query: 291  MMQEGDTLYSP--ANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGR 348
             + + +TL +        +H +N  L+A+ LFEK+ +YIVTPD +V IVDE TGR M GR
Sbjct: 474  QLHKKETLIADFQEKSKRIHTINQLLKAYTLFEKDTEYIVTPDHKVKIVDEQTGRVMEGR 533

Query: 349  RWSDGLHQAVEAKEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGL 408
            R+SDGLHQA+EAKE VK+++  QT A++T QNYFR+Y KLSGMTGTA+TEA EF  IY L
Sbjct: 534  RYSDGLHQAIEAKENVKVEDATQTYATVTLQNYFRMYHKLSGMTGTAETEAGEFWDIYKL 593

Query: 409  ETVVIPTNKPMVRNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSN 468
            + VVIPTN+P+ R D  D VY++  EK+ A+ ++I +  + G+PVLVGT S+E SELLS 
Sbjct: 594  DVVVIPTNRPIQRKDEHDKVYKTVREKYNAVADEIVELTQAGRPVLVGTTSVEISELLSR 653

Query: 469  ALKKAGIKHNVLNAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLD 528
             LK   I H VLNAK H+KEAEIVAEAGKPG VTIATNMAGRGTDI L    +A      
Sbjct: 654  MLKLRNINHQVLNAKMHQKEAEIVAEAGKPGTVTIATNMAGRGTDIKLAPESKA------ 707

Query: 529  NPTQEQIDAIKAEWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFY 588
                                   AGGL IIGTERHESRR+D QLRGR+GRQGD GSS+F+
Sbjct: 708  -----------------------AGGLAIIGTERHESRRVDRQLRGRAGRQGDPGSSQFF 744

Query: 589  LSMEDTLLRIFTSDRMAALI-QSGMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLE 647
            +S+ED L+R+F SDR+A L+ + G++EGE I+  M++ SIE+AQ+KVE  NF  RK+LLE
Sbjct: 745  VSLEDNLMRLFGSDRIARLMDRMGLEEGEVIQHSMITNSIERAQKKVEENNFGQRKRLLE 804

Query: 648  YDDVANDQRKVVYELRDELMSAD----DISDMIAQNREDVLNAV--MDEY---------- 691
            YDDV N QR+VVY+ R   +  +    D+ +MI    EDV+ +   +++Y          
Sbjct: 805  YDDVMNAQREVVYKRRRNALYGERLELDVWNMIYDISEDVVVSYKNINDYENFQLHILRV 864

Query: 692  IPPQSLEDMWDIKG-----LEDRLKNDFDLPLPIQSWLDADNKLYEEAL---------RE 737
               +S     D +G     L +RL N+      +  +L+ + +   +A          R 
Sbjct: 865  FGIESSISEADFRGTQANQLAERLYNE-----ALNHYLERNKQTAAQAFPIIADIHQNRG 919

Query: 738  RIIEQ-AVEVYKAKEQAVSPA------------VMRNFEKSVMLQTLDTLWKEHLAAMDH 784
             +IE  AV     K Q  + A            ++R  EK + L T+D  W EHL  MD 
Sbjct: 920  PMIENVAVPFTDGKRQLAAVANLTKTFESQGLELIRAMEKIITLGTIDQAWTEHLRQMDD 979

Query: 785  LRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVL--SKVRVQQQEEVERMEA 842
            L+Q +    Y QK+P   YK ESFELF+ ++  +    I  L  + + VQ  E+V     
Sbjct: 980  LKQSVQNAVYEQKDPLLIYKFESFELFKRMIGKVNEQTIQFLFHAHIPVQAPEQVREPRP 1039

Query: 843  QRRAQAEEAARHAQAQHASADD--------AEQDESNQPMVRDERKVGRNE 885
            Q+  +        Q  H+S +D        A + E   P    ++  GRNE
Sbjct: 1040 QQAPKPPVLKEQKQEVHSSLEDETGHTTAPAAEPEKIMP-AHSQKLAGRNE 1089



 Score = 34.3 bits (77), Expect = 4e-05
 Identities = 15/52 (28%), Positives = 30/52 (57%)

Query: 4  KLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIE 55
          K + K+ G+++DR ++ +   V +IN        L+D++L+ KT E +  I+
Sbjct: 7  KTVAKLFGTKSDRDIKEVIPYVSKINEEYAKLNTLTDDQLRQKTFEIKGIID 58