Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 901 a.a., protein translocase subunit SecA from Magnetospirillum magneticum AMB-1

 Score =  926 bits (2393), Expect = 0.0
 Identities = 502/917 (54%), Positives = 645/917 (70%), Gaps = 35/917 (3%)

Query: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL 60
           M   L  ++ G+ NDR L+ L+K V+ +N  EPAFE LSD+EL+AKT EFR R+E G  L
Sbjct: 1   MFGALARRIFGTANDRVLKPLKKHVEAVNALEPAFEKLSDDELRAKTAEFRARLESGTEL 60

Query: 61  DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA 120
           + L+ EAFATVREA+KR  G RHFDVQL+GGMVLH G+I+EM+TGEGKTL ATL  YLNA
Sbjct: 61  NDLMAEAFATVREAAKRTLGQRHFDVQLLGGMVLHQGRISEMKTGEGKTLVATLPVYLNA 120

Query: 121 LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN 180
           L  KGVH+VTVNDYLAKRD+E    ++ FLG+TVGV +  M    +++AY  D+ YGTNN
Sbjct: 121 LTAKGVHVVTVNDYLAKRDSEWMGQVYRFLGLTVGVIVHGMDDLERQQAYACDVTYGTNN 180

Query: 181 EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN 240
           E GFDYLRDNM FR E+ VQR   +A+VDEVDSIL+DEARTPLIISGP ED+SDLY  ++
Sbjct: 181 ELGFDYLRDNMKFRLEEMVQRPFNYAIVDEVDSILVDEARTPLIISGPTEDNSDLYRLVD 240

Query: 241 KLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYS 300
           KL+P L  +D            F  DEK + V LT+ G E VEE+L    +M+   TLY 
Sbjct: 241 KLMPSLVAED------------FEKDEKVRAVTLTDRGTEHVEEMLRTADLMK--GTLYD 286

Query: 301 PANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEA 360
             N+SL+HHVN ALRAH LF ++VDYIV  D +V+I+DE TGR M GRR+S+GLHQA+EA
Sbjct: 287 IGNVSLVHHVNQALRAHKLFTRDVDYIVKND-KVIIIDEFTGRMMEGRRYSEGLHQALEA 345

Query: 361 KEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMV 420
           KEGV IQNENQTLASITFQNYFRLY KL+GMTGTA TEA EF +IY LE V IPTN  + 
Sbjct: 346 KEGVTIQNENQTLASITFQNYFRLYPKLAGMTGTAMTEAGEFAEIYNLEVVEIPTNLAVS 405

Query: 421 RNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVL 480
           R D  D VYR+  EK+ AI+  I++   + QPVLVGT SIEKSELLS+ LKK  I H VL
Sbjct: 406 RTDHDDEVYRTAKEKYEAIVTLIEECRGRMQPVLVGTTSIEKSELLSDMLKKKKIPHQVL 465

Query: 481 NAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGS--WQAKVEKLD--NPTQ--EQ 534
           NA++HE+EA IVA+AG PG VTIATNMAGRGTDI LGG+   + ++E  D  +P +  ++
Sbjct: 466 NARYHEQEAYIVAQAGVPGGVTIATNMAGRGTDIQLGGNLDMRTRMELADVTDPAERVKR 525

Query: 535 IDAIKAEWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDT 594
           I+ +KAE +    +V ++GGL+++G+ERHESRRIDNQLRGRSGRQGD G+S+F+LS+ED 
Sbjct: 526 IEGLKAEIEVNKQKVRESGGLYVVGSERHESRRIDNQLRGRSGRQGDPGASKFFLSLEDD 585

Query: 595 LLRIFTSDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVAN 653
           L+RIF S RM  ++Q  G+ +GEAI    +++++EKAQ+KVE RNFDIRK LL++DDV N
Sbjct: 586 LMRIFGSQRMDGMLQKLGLKDGEAIVHPWINKALEKAQQKVEARNFDIRKNLLKFDDVMN 645

Query: 654 DQRKVVYELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKND 713
           DQRKV+YE R +LMSADD+S+ I   R +V+  ++   IP ++  D WD+  L + +   
Sbjct: 646 DQRKVIYEQRKDLMSADDVSEEIVAFRHEVIAEMVARCIPERAYADQWDVAALHEEVLRV 705

Query: 714 FDLPLPIQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDT 773
           F+L LPI  W   +  + ++ +R+RI + A     AK    +P  MR  EKS++LQ LD 
Sbjct: 706 FNLDLPIAEW-GKEEGIADQEIRDRITDHADRKAAAKVAEYTPDTMRMVEKSLLLQILDQ 764

Query: 774 LWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKV--RV 831
            WKEHL  +DHLRQGI LR YAQ++P  EYKRE+F +FE +L  L+  V +VL+ V  R 
Sbjct: 765 AWKEHLLQLDHLRQGISLRAYAQRDPLNEYKREAFNMFEQMLLDLRERVTSVLAHVQLRF 824

Query: 832 QQQEEVER-MEAQRRAQAEE-------AARHAQAQHASADDAEQDESNQPMVRDERKVGR 883
             +EE E+ +E QR A+ +E       ++  + A  A A      + N P         R
Sbjct: 825 SSEEEAEQALEPQRPARTQETREDPAFSSGGSGAPFALAQRNTAVDPNDPAT--WAATPR 882

Query: 884 NEPCPCGSGKKYKQCHG 900
           N PCPCGSGKK+K CHG
Sbjct: 883 NAPCPCGSGKKFKHCHG 899