Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 901 a.a., preprotein translocase subunit SecA from Escherichia coli ECRC62

 Score = 1319 bits (3414), Expect = 0.0
 Identities = 658/903 (72%), Positives = 762/903 (84%), Gaps = 4/903 (0%)

Query: 1   MITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENL 60
           M+ KLLTKV GSRNDRTLRR+RK+V  IN  EP  E LSDEELK KT EFR R+E+GE L
Sbjct: 1   MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVL 60

Query: 61  DQLLPEAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNA 120
           + L+PEAFA VREASKRVFGMRHFDVQL+GGMVL+   IAEMRTGEGKTLTATL AYLNA
Sbjct: 61  ENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNA 120

Query: 121 LPGKGVHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNN 180
           L GKGVH+VTVNDYLA+RDAE NRPLFEFLG+TVG+N+P MP PAK+EAY ADI YGTNN
Sbjct: 121 LTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNN 180

Query: 181 EFGFDYLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRIN 240
           E+GFDYLRDNMAF PE+RVQR   +A+VDEVDSILIDEARTPLIISGPAEDSS++Y R+N
Sbjct: 181 EYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVN 240

Query: 241 KLIPLLQKQDKEDSEEYRGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYS 300
           K+IP L +Q+KEDSE ++G+GHF+VDEKS+QV+LTE G   +EELLVK G+M EG++LYS
Sbjct: 241 KIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYS 300

Query: 301 PANISLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEA 360
           PANI L+HHV AALRAH LF ++VDYIV  DGEV+IVDEHTGRTM GRRWSDGLHQAVEA
Sbjct: 301 PANIMLMHHVTAALRAHALFTRDVDYIV-KDGEVIIVDEHTGRTMQGRRWSDGLHQAVEA 359

Query: 361 KEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMV 420
           KEGV+IQNENQTLASITFQNYFRLYEKL+GMTGTADTEAFEF  IY L+TVV+PTN+PM+
Sbjct: 360 KEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMI 419

Query: 421 RNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVL 480
           R D+PD+VY +EAEK  AIIEDIK+R  KGQPVLVGT+SIEKSEL+SN L KAGIKHNVL
Sbjct: 420 RKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVL 479

Query: 481 NAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQEQIDAIKA 540
           NAKFH  EA IVA+AG P AVTIATNMAGRGTDIVLGGSWQA+V  L+NPT EQI+ IKA
Sbjct: 480 NAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAALENPTVEQIEKIKA 539

Query: 541 EWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFT 600
           +W+  HD VL+AGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMED L+RIF 
Sbjct: 540 DWQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFA 599

Query: 601 SDRMAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVV 659
           SDR++ +++  GM  GEAIE   ++++I  AQRKVE RNFDIRKQLLEYDDVANDQR+ +
Sbjct: 600 SDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAI 659

Query: 660 YELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDFDLPLP 719
           Y  R+EL+   D+S+ I   REDV  A +D YIPPQSLE+MWDI GL++RLKNDFDL LP
Sbjct: 660 YSQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLP 719

Query: 720 IQSWLDADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHL 779
           I  WLD + +L+EE LRERI+ Q++EVY+ KE+ V   +MR+FEK VMLQTLD+LWKEHL
Sbjct: 720 IAEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHL 779

Query: 780 AAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQEEVER 839
           AAMD+LRQGIHLRGYAQK+PKQEYKRESF +F  +LESLK +VI+ LSKV+V+  EEVE 
Sbjct: 780 AAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEE 839

Query: 840 MEAQRRAQAEEAARHAQAQHASADDAEQDESNQPMVRDERKVGRNEPCPCGSGKKYKQCH 899
           +E QRR +AE  A+  Q  H   DD     +       ERKVGRN+PCPCGSGKKYKQCH
Sbjct: 840 LEQQRRMEAERLAQMQQLSH--QDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCH 897

Query: 900 GQI 902
           G++
Sbjct: 898 GRL 900