Pairwise Alignments

Query, 903 a.a., protein translocase subunit SecA from Vibrio cholerae E7946 ATCC 55056

Subject, 1127 a.a., Preprotein translocase subunit SecA (ATPase, RNA helicase) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  630 bits (1625), Expect = 0.0
 Identities = 428/1122 (38%), Positives = 587/1122 (52%), Gaps = 271/1122 (24%)

Query: 2    ITKLLTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFR---------- 51
            I K LTKV G+++DR ++ L   V +IN       +++DEEL+ KT+E R          
Sbjct: 5    IAKGLTKVFGTKSDRDIKELYPFVGKINTAFDQLSSITDEELRNKTIEIRGVVDSELKTF 64

Query: 52   -----------------------------QRIEQGEN------LDQLLPEAFATVREASK 76
                                          ++E+  N      L+++LPEAFA V+E ++
Sbjct: 65   DDNIATLKAEIEALAPDKVHEKDALFNQIDKVEKDRNEALEVVLEKVLPEAFAVVKETAR 124

Query: 77   R---------------------------------------------VFGMRHFDVQLIGG 91
            R                                              + M H+DVQLIGG
Sbjct: 125  RFKENGKLVVKANDYDRELSAKKDNVEINGDDAIWHNQWLAAGTEITWDMLHYDVQLIGG 184

Query: 92   MVLHGGQIAEMRTGEGKTLTATLAAYLNALPGKGVHIVTVNDYLAKRDAETNRPLFEFLG 151
            + LH G+I+EM TGEGKTL +TL AYLNAL G+GVHIVTVNDYLAKRD+E N PLFEF G
Sbjct: 185  IALHKGKISEMATGEGKTLVSTLPAYLNALAGRGVHIVTVNDYLAKRDSEWNAPLFEFHG 244

Query: 152  MTVGVNIPNMPQPA-KKEAYQADILYGTNNEFGFDYLRDNMAFRPEDRVQRARFFAVVDE 210
            +TV       P  A +++AY +DI+YGTNNEFGFDYLRDNMA   +D VQ    FA++DE
Sbjct: 245  LTVDCIDKYQPNSAGRRKAYNSDIVYGTNNEFGFDYLRDNMARNADDLVQGKHHFAMIDE 304

Query: 211  VD--------------------------------SILIDEART----------PLIISGP 228
            VD                                S L+DE R            LI  G 
Sbjct: 305  VDSVLIDDARTPLIISGPVPRGDEHEFYEMKPRVSTLVDEQRKLIQGYLSTAKKLIGEGN 364

Query: 229  AEDSSDLYIRINKLIP----------------LLQKQDK---EDSEEYRGDGH----FTV 265
             ++      R  + +P                +LQK +    +D++    +      FT+
Sbjct: 365  QKEGGLALFRAYRGMPKYKPLIKYLSEPGIRVVLQKTENYYLQDNKRMMPEADEPLLFTI 424

Query: 266  DEKSKQVHLTETGQEFVEEL------------------LVKNGMMQEGDTLYSPANI--- 304
            DEKS  V LT+ G E + +                   + K+  + + + L     I   
Sbjct: 425  DEKSNTVDLTDNGIEVITKKNEDSSFFILPDIGTEIAEMEKDESIDDKEKLIRKEEIIKD 484

Query: 305  -----SLLHHVNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVE 359
                   +H VN  L+A+ +FEK+ +YI+  DG+V IVDE TGR M GRR+SDGLHQA+E
Sbjct: 485  YGVKAQRIHTVNQLLKAYCMFEKDTEYILV-DGKVKIVDEQTGRVMEGRRYSDGLHQAIE 543

Query: 360  AKEGVKIQNENQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPM 419
            AKE VK+++  QT A+IT QNYFR+Y KLSGMTGTA+TEA EF +IY L+ VVIPTNKP+
Sbjct: 544  AKENVKVEDATQTYATITLQNYFRMYHKLSGMTGTAETEAGEFWEIYKLDVVVIPTNKPI 603

Query: 420  VRNDMPDVVYRSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNV 479
             R+D  D VY++  EKF A++++I +  E G+PVLVGT S+E SE+LS  L    IKH V
Sbjct: 604  QRDDRDDKVYKTVREKFNAVVDEINELTEAGRPVLVGTTSVEISEVLSRMLTLKKIKHQV 663

Query: 480  LNAKFHEKEAEIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQEQIDAIK 539
            LNAK H KEAE+VAEAGKPG VTIATNMAGRGTDI                         
Sbjct: 664  LNAKQHAKEAEVVAEAGKPGTVTIATNMAGRGTDI------------------------- 698

Query: 540  AEWKQVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIF 599
                ++  +  +AGGL IIGTERHESRR+D QLRGR+GRQGD GSS+F++S+ED+L+R+F
Sbjct: 699  ----KLTPEAKKAGGLAIIGTERHESRRVDRQLRGRAGRQGDVGSSQFFVSLEDSLMRLF 754

Query: 600  TSDRMAALI-QSGMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKV 658
             S+R+A L+ + G++EGE I+  M+S+SIE+AQRKVE  NF +RK+LLEYDDV N QR+V
Sbjct: 755  GSERIAKLMDRMGLEEGEVIQHSMISKSIERAQRKVEENNFGVRKRLLEYDDVMNSQREV 814

Query: 659  VYELRDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDM---------WDIKGLEDR 709
            VY+ R   +  + +   I     DV   +++     + +E +          D K  ED 
Sbjct: 815  VYKRRKNALMGERLELDILNVMYDVCEGIVEVAKSTEDMESLRMNIYSSLGIDYKFSEDD 874

Query: 710  LKNDFDLPLPIQSWLDADNKLYEEALRERIIEQAVEVYK---------AKEQAV------ 754
            +K+    P+  Q   DA  K Y  A  +R+ ++A+ V K          KE  V      
Sbjct: 875  IKSK-PAPVLSQELFDASYKNY-VAKNQRVTDRALPVLKDVYENRGATVKEIMVPITDGI 932

Query: 755  ----------------SPAVMRNFEKSVMLQTLDTLWKEHLAAMDHLRQGIHLRGYAQKN 798
                               ++R  EK+V L  +D  WKEHL  MD L+Q +    Y QK+
Sbjct: 933  KQIGVVCNLQSTLDNEGRDLIRAIEKNVTLAIIDQNWKEHLRDMDDLKQSVQNAVYEQKD 992

Query: 799  PKQEYKRESFELFEDLLESLKSDVITVLSKVRVQQQ--EEVERMEAQR------RAQAEE 850
            P   YK E+FE+F+  +  L  DVI+ L+K  + +Q  ++V   +AQ+      +A  EE
Sbjct: 993  PLLIYKFEAFEMFKRFVGKLNEDVISFLAKAELPKQNPDQVRAAQAQQQPEPKVQASKEE 1052

Query: 851  A-------ARHAQAQHASADDAEQDESNQPMVRDERKVGRNE 885
            A       A  A    A+A+   Q ++  P  + E+  GRN+
Sbjct: 1053 ANSTLNPHANRAAQAAAAANRGAQKQAVAPR-KSEKAYGRND 1093