Pairwise Alignments

Query, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Carbamoyl-phosphate synthase small chain from Xanthobacter sp. DMC5

 Score =  389 bits (998), Expect = e-112
 Identities = 206/383 (53%), Positives = 260/383 (67%), Gaps = 10/383 (2%)

Query: 4   SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
           +ALLVL DGTV  G  IGA G   GEV FNT++TGY+EILTDPSY+ QI+T T+PHIGN 
Sbjct: 21  TALLVLADGTVLEGFGIGATGHLAGEVCFNTAITGYEEILTDPSYAGQIITFTFPHIGNV 80

Query: 64  GTNSEDEESTAIHA----QGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLT 119
           GTN ED E+ ++ +    +G+V+R      SN+R+ +   D+LK++ I GI  IDTR LT
Sbjct: 81  GTNEEDIETVSMASASGVRGVVLRTAVTDPSNYRATRHFDDWLKARGIPGITGIDTRALT 140

Query: 120 RILREKGAQNGCIM-AGDNLDEALAL-AKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTL 177
            ++RE G  N  I  A D + +  AL A+A+ +PGL GMDL   V++ + + W + +W  
Sbjct: 141 ALIREAGMPNAVIAHAPDGVFDIEALKAEARAWPGLVGMDLVPGVTSIQRFDWDETTWDP 200

Query: 178 EGGLPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVF 237
           E G    +A     +HVVA D+G KRNILR+L   GC++TVVPA TSAED+LAL PDGVF
Sbjct: 201 ETGYGRQEAPR---HHVVAIDYGVKRNILRLLARAGCKVTVVPATTSAEDILALQPDGVF 257

Query: 238 LSNGPGDPEPC-TYAIEATRVFLEKNIPVFGICLGHQILALASGAKTVKMKFGHHGANHP 296
           LSNGPGDP     YA+   +  +EK +P FGICLGHQ++ LA G +TVKM  GHHGANHP
Sbjct: 258 LSNGPGDPAATGEYAVPVIQKVIEKGVPTFGICLGHQMIGLAVGGRTVKMHQGHHGANHP 317

Query: 297 VKDLDRGVVMITSQNHGFAADEATLPDNLRATHKSLFDGSLQGIHRTDKPAFSFQGHPEA 356
           VKDL  G V ITS NHGFA D  +LP N   TH SLFDGS  GI   DKP FS Q HPEA
Sbjct: 318 VKDLTTGKVEITSMNHGFAVDRDSLPKNAVETHVSLFDGSNAGIALADKPVFSVQYHPEA 377

Query: 357 SPGPHDAAPLFDHFIELIKQFRA 379
           SPGP D+  LFD F+ +I++ +A
Sbjct: 378 SPGPQDSHYLFDRFVTMIEKHKA 400