Pairwise Alignments

Query, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., carbamoyl phosphate synthase small subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  308 bits (788), Expect = 2e-88
 Identities = 166/377 (44%), Positives = 225/377 (59%), Gaps = 18/377 (4%)

Query: 2   SKSALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIG 61
           S  A+L+LEDGTV++G S+G  G S GE+ FNT MTGYQEI TDPSY  Q+V  T  H+G
Sbjct: 6   SSEAILLLEDGTVYKGKSLGRIGTSGGELCFNTGMTGYQEIFTDPSYYGQLVVTTVSHVG 65

Query: 62  NTGTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRI 121
           N G   ++ ES  +   GLV ++     S   +E SL DY +   +VGI +IDTR L R 
Sbjct: 66  NYGVQHQEVESGKVQISGLVCKEFSHHFSRKTAEGSLQDYFEKAGVVGICEIDTRALVRH 125

Query: 122 LREKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGGL 181
           +R+KGA N  I++ +  D         E P + G++L+  VST + Y  K          
Sbjct: 126 IRDKGAMNA-IVSSEITDVEQLRKMLAEVPSMDGLELSSHVSTPDEYHLK---------- 174

Query: 182 PEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSNG 241
           PE     E+ + V   D G KRN L   + RGC + V P  T  E++   NPDG F+SNG
Sbjct: 175 PE-----EVKFRVAVLDLGVKRNSLNNFMQRGCEVKVFPYNTPFEEMEKWNPDGYFISNG 229

Query: 242 PGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASGAKTVKMKFGHHGANHPVKDLD 301
           PGDP    +A+++ +  LE++ P+FGIC+GHQILA A+G  T KM  GH G N PVK+L 
Sbjct: 230 PGDPAATKHAVQSVKQILERDRPMFGICMGHQILAQANGIATYKMHNGHRGLNQPVKNLL 289

Query: 302 RGVVMITSQNHGFAADEATLPD--NLRATHKSLFDGSLQGIHRTDKPAFSFQGHPEASPG 359
            G   ITSQNHGF  D   L +  ++  TH +L D +++G+    KPAFS Q HPE+SPG
Sbjct: 290 TGKSEITSQNHGFVVDAEQLKNHPDVEITHINLNDNTVEGMRMRTKPAFSVQYHPESSPG 349

Query: 360 PHDAAPLFDHFIELIKQ 376
           PHD+  LFD F+ L+++
Sbjct: 350 PHDSTYLFDEFVALLEK 366