Pairwise Alignments

Query, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., carbamoyl-phosphate synthase small subunit from Magnetospirillum magneticum AMB-1

 Score =  397 bits (1020), Expect = e-115
 Identities = 206/373 (55%), Positives = 263/373 (70%), Gaps = 6/373 (1%)

Query: 7   LVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTGTN 66
           LVL DG+V  G  IGA G +VGEVVF T MTGYQE LTDPS++ Q++T T+PH+GN GTN
Sbjct: 30  LVLADGSVLWGKGIGATGSNVGEVVFTTGMTGYQETLTDPSFAGQVITFTFPHVGNVGTN 89

Query: 67  SEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILREKG 126
            ED E+T   A+GL++R      +N+RS + L  +LK+ NIVG+  +DTR LTR +R KG
Sbjct: 90  VEDLETTTPAARGLILRADITDPANWRSAKHLDSWLKANNIVGLCGVDTRALTRRIRAKG 149

Query: 127 AQNGCIM-AGDNLDEALAL-AKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGGLPEA 184
           A NG I+ A D   +  AL  KA  +PGL+GMDLA+ V+  + Y+W +  W+L GG    
Sbjct: 150 APNGVIVNAPDGAFDLPALWGKAAGWPGLEGMDLARDVTCAQTYSWDETEWSLRGGYGR- 208

Query: 185 KADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 244
              ++  +HVVA DFGAKRNILR L + GC++TV+PA+ +AE VLAL PDGVFLSNGPGD
Sbjct: 209 --QAKPRFHVVAVDFGAKRNILRCLAETGCKVTVLPAEATAEQVLALEPDGVFLSNGPGD 266

Query: 245 PEPC-TYAIEATRVFLEKNIPVFGICLGHQILALASGAKTVKMKFGHHGANHPVKDLDRG 303
           P    TYA+   +  ++   P+FGICLGHQ+L LA GAKT KM  GH GANHPVKDL+ G
Sbjct: 267 PAATGTYAVPMIQGVIKSGKPLFGICLGHQMLGLALGAKTFKMDTGHRGANHPVKDLETG 326

Query: 304 VVMITSQNHGFAADEATLPDNLRATHKSLFDGSLQGIHRTDKPAFSFQGHPEASPGPHDA 363
            V ITSQNHGF  DE +LP  ++ TH+SLFDGS++GI    KP FS Q HPEASPGP DA
Sbjct: 327 KVEITSQNHGFVVDEKSLPAGVKVTHRSLFDGSVEGIAVDGKPVFSVQYHPEASPGPQDA 386

Query: 364 APLFDHFIELIKQ 376
             LF+ F+ L+++
Sbjct: 387 HYLFERFVGLMEK 399